How to Install and Uninstall r-bioc-singler Package on Ubuntu 22.04 LTS (Jammy Jellyfish)

Last updated: May 17,2024

You can also install and uninstall the r-bioc-singler on the following distributions in the same way, as they are all based on the Ubuntu system

Kubuntu 22.04 LTS
Lubuntu 22.04 LTS
Xubuntu 22.04 LTS
Ubuntu MATE 22.04 LTS
Ubuntu Studio 22.04 LTS
Pop!_OS 22.04 LTS
Zorin OS 16 / Zorin OS 17
Ubuntu Budgie 22.04

1. Install "r-bioc-singler" package

Please follow the step by step instructions below to install r-bioc-singler on Ubuntu 22.04 LTS (Jammy Jellyfish)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                r-bioc-singler
            
                    
    
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2. Uninstall "r-bioc-singler" package

Please follow the step by step instructions below to uninstall r-bioc-singler on Ubuntu 22.04 LTS (Jammy Jellyfish):


    
        
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                sudo apt remove
            
                        
                r-bioc-singler
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the r-bioc-singler package on Ubuntu 22.04 LTS (Jammy Jellyfish)

Package: r-bioc-singler
Architecture: amd64
Version: 1.8.1+ds-2
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 561
Depends: r-base-core (>= 4.1.2-1ubuntu2), r-api-4.0, r-api-bioc-3.14, r-bioc-summarizedexperiment, r-cran-matrix, r-bioc-s4vectors, r-bioc-delayedarray, r-bioc-delayedmatrixstats, r-bioc-biocneighbors, r-bioc-biocparallel, r-bioc-biocsingular, r-cran-rcpp, r-bioc-beachmat, libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 11)
Recommends: r-cran-testthat, r-bioc-singlecellexperiment, r-bioc-scater, r-bioc-scran, r-cran-pheatmap, r-bioc-ensembldb
Suggests: r-cran-knitr, r-cran-rmarkdown, r-bioc-biocstyle, r-bioc-biocgenerics, r-bioc-scuttle, r-bioc-scrnaseq, r-cran-ggplot2, r-cran-gridextra, r-cran-viridis
Filename: pool/universe/r/r-bioc-singler/r-bioc-singler_1.8.1+ds-2_amd64.deb
Size: 308062
MD5sum: 0431d718930d3ee2d7ef6898b8ee898c
SHA1: b5924bcf9b3ee788358004e62dd796a9a329ec26
SHA256: 1425c8f484fe54391ca66c56cda6e9f4ff53cf54979517ef85f3af158b58c036
SHA512: cd2c284df2098af8e25716b63d904d70528737254475dfd2ee8765f75cc7118a9cfcd9491a55774232cb4a5d122fcca4db02ce61d9f5f6f926c43a91fe2c035d
Homepage: https://bioconductor.org/packages/SingleR/
Description: BioConductor reference-based single-cell RNA-Seq annotation
Description-md5: 1251b681038aa1eab4917f1964230911