How to Install and Uninstall r-bioc-singler Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 22,2024

1. Install "r-bioc-singler" package

This tutorial shows how to install r-bioc-singler on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                r-bioc-singler
            
                    
    
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2. Uninstall "r-bioc-singler" package

This is a short guide on how to uninstall r-bioc-singler on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                r-bioc-singler
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the r-bioc-singler package on Ubuntu 21.10 (Impish Indri)

Package: r-bioc-singler
Architecture: amd64
Version: 1.4.1+ds-1
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 524
Depends: r-base-core (>= 4.0.4-1build1), r-api-4.0, r-api-bioc-3.12, r-bioc-summarizedexperiment, r-cran-matrix, r-bioc-s4vectors, r-bioc-delayedarray, r-bioc-delayedmatrixstats, r-bioc-biocneighbors, r-bioc-biocparallel, r-bioc-biocsingular, r-cran-rcpp, r-bioc-beachmat, libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2)
Recommends: r-cran-testthat, r-bioc-singlecellexperiment, r-bioc-scater, r-bioc-scran, r-cran-pheatmap, r-bioc-ensembldb
Suggests: r-cran-knitr, r-cran-rmarkdown, r-bioc-biocstyle, r-bioc-biocgenerics, r-bioc-scuttle, r-bioc-scrnaseq, r-cran-ggplot2, r-cran-gridextra, r-cran-viridis
Filename: pool/universe/r/r-bioc-singler/r-bioc-singler_1.4.1+ds-1_amd64.deb
Size: 276596
MD5sum: e9ec9111f5c83605bb4ac9cfd245acfa
SHA1: 8b187eb164f56aba366189274cdbb48e5eda0825
SHA256: 6489a7f0e10dee0393089f3c13de81a9285bb7dc8e4c3ce34555a5f1d3d71589
SHA512: a86fbfd9689ed3f38237add75d7f03ab0a959c0af819b1437d72d703066628ec82335ce4ddc781e492fd5ead31168ce006c558c1f630981837c6d17c085ad576
Homepage: https://bioconductor.org/packages/SingleR/
Description-en: BioConductor reference-based single-cell RNA-Seq annotation
Performs unbiased cell type recognition from single-cell RNA
sequencing data, by leveraging reference transcriptomic datasets of pure cell
types to infer the cell of origin of each single cell independently.
Description-md5: 1251b681038aa1eab4917f1964230911