How to Install and Uninstall ampliconnoise Package on Ubuntu 16.04 LTS (Xenial Xerus)

Last updated: December 24,2024

1. Install "ampliconnoise" package

This tutorial shows how to install ampliconnoise on Ubuntu 16.04 LTS (Xenial Xerus)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                ampliconnoise
            
                    
    
    Copied

2. Uninstall "ampliconnoise" package

Please follow the steps below to uninstall ampliconnoise on Ubuntu 16.04 LTS (Xenial Xerus):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                ampliconnoise
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the ampliconnoise package on Ubuntu 16.04 LTS (Xenial Xerus)

Package: ampliconnoise
Priority: extra
Section: universe/science
Installed-Size: 1362
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Architecture: amd64
Version: 1.29-5build1
Depends: libc6 (>= 2.14), libgsl2, libopenmpi1.10, mafft
Recommends: openmpi-bin
Filename: pool/universe/a/ampliconnoise/ampliconnoise_1.29-5build1_amd64.deb
Size: 473218
MD5sum: 2d5bbc8e3ac07d2d91df2ed9042f9a26
SHA1: 2a9aaf648a404f9e789d7fd2a3cb5f7c5f098503
SHA256: ea97ff3a8c12ab94c2b556e3e2ee6930b8c74d56847b886956352dc7fb9dbe39
Description-en: removal of noise from 454 sequenced PCR amplicons
AmpliconNoise is a package of applications to clean up high-throughput
sequence data. It consists of three main parts:
.
Pyronoise - does flowgram-based clustering to spot misreads
SeqNoise - removes PCR point mutations
Perseus - removes PCR chimeras without the need for a set of reference
sequences
.
Previously there was a standalone "Pyronoise" by the same authors and
this package includes an updated version. There is also a "Denoiser"
in Qiime which is related but distinct.
Description-md5: cd8d15fcdec00d4fc4f08c519dbff884
Homepage: http://code.google.com/p/ampliconnoise/
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Origin: Ubuntu