How to Install and Uninstall bedtools Package on Ubuntu 16.04 LTS (Xenial Xerus)

Last updated: November 22,2024

1. Install "bedtools" package

Please follow the step by step instructions below to install bedtools on Ubuntu 16.04 LTS (Xenial Xerus)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                bedtools
            
                    
    
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2. Uninstall "bedtools" package

This guide covers the steps necessary to uninstall bedtools on Ubuntu 16.04 LTS (Xenial Xerus):


    
        
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                sudo apt remove
            
                        
                bedtools
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the bedtools package on Ubuntu 16.04 LTS (Xenial Xerus)

Package: bedtools
Priority: optional
Section: universe/science
Installed-Size: 1879
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Architecture: amd64
Version: 2.25.0-1
Depends: libc6 (>= 2.15), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.3.3)
Suggests: filo
Filename: pool/universe/b/bedtools/bedtools_2.25.0-1_amd64.deb
Size: 560562
MD5sum: 7710cd3c3e8ec1164ddcfe192b97fa76
SHA1: d5167723752af91dd293926257629ee34577636f
SHA256: a2703055ebe520742e3d761be6ad9b0ff9414a271fdfe469b374fd730b8d2db3
Description-en: suite of utilities for comparing genomic features
The BEDTools utilities allow one to address common genomics tasks such as
finding feature overlaps and computing coverage. The utilities are largely
based on four widely-used file formats: BED, GFF/GTF, VCF, and SAM/BAM. Using
BEDTools, one can develop sophisticated pipelines that answer complicated
research questions by streaming several BEDTools together.
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The groupBy utility is distributed in the filo package.
Description-md5: 58af131119baf6930c142074f356e7c9
Homepage: http://code.google.com/p/bedtools/
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Origin: Ubuntu