How to Install and Uninstall gbrowse Package on Ubuntu 16.04 LTS (Xenial Xerus)

Last updated: November 07,2024

1. Install "gbrowse" package

Please follow the guidance below to install gbrowse on Ubuntu 16.04 LTS (Xenial Xerus)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                gbrowse
            
                    
    
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2. Uninstall "gbrowse" package

This is a short guide on how to uninstall gbrowse on Ubuntu 16.04 LTS (Xenial Xerus):


    
        
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                sudo apt remove
            
                        
                gbrowse
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the gbrowse package on Ubuntu 16.04 LTS (Xenial Xerus)

Package: gbrowse
Priority: optional
Section: universe/science
Installed-Size: 6859
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Architecture: all
Version: 2.54+dfsg-6build1
Depends: perl, apache2 (>= 2.4) | httpd-cgi, bioperl (>= 1.6.901), libbio-graphics-perl (>= 2.31), libcgi-session-perl, libgd-gd2-noxpm-perl | libgd-gd2-perl, libio-string-perl, libjson-perl, libstatistics-descriptive-perl, libwww-perl, libhttp-daemon-perl, libterm-readkey-perl, sqlite3, libdbd-sqlite3-perl, libjs-prototype (>= 1.7), libjs-scriptaculous (>= 1.9), libvm-ec2-perl
Recommends: apache2 (>= 2.4.17~) | httpd
Suggests: gbrowse-data, gbrowse-calign, libfile-nfslock-perl
Filename: pool/universe/g/gbrowse/gbrowse_2.54+dfsg-6build1_all.deb
Size: 2136366
MD5sum: 7d9664f538bd52e8f6c38c6a6a1fd4a4
SHA1: 2e4c33f0ebcf897fed2e76edc059e80457c94e00
SHA256: d43fb6322dea88c90291027b9fdb78f3b44fe5b3ac6f0db1c49f1105c9877302
Description-en: GMOD Generic Genome Browser
Generic Genome Browser is a simple but highly
configurable web-based genome browser. It is a component of the
Generic Model Organism Systems Database project (GMOD).
Some of its features:
* Simultaneous bird's eye and detailed views of the genome;
* Scroll, zoom, center;
* Attach arbitrary URLs to any annotation;
* Order and appearance of tracks are customizable by administrator and
end-user;
* Search by annotation ID, name, or comment;
* Supports third party annotation using GFF formats;
* Settings persist across sessions;
* DNA and GFF dumps;
* Connectivity to different databases, including BioSQL and Chado;
* Multi-language support;
* Third-party feature loading;
* Customizable plug-in architecture (e.g. run BLAST, dump & import many
formats, find oligonucleotides, design primers, create restriction maps,
edit features).
Description-md5: 0aa2912bfc190ad55fe33a0ecfc2aabe
Homepage: http://www.gbrowse.org/
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Origin: Ubuntu