How to Install and Uninstall gbrowse Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 07,2024

1. Install "gbrowse" package

Please follow the instructions below to install gbrowse on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                gbrowse
            
                    
    
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2. Uninstall "gbrowse" package

Please follow the guidance below to uninstall gbrowse on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                gbrowse
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the gbrowse package on Ubuntu 20.10 (Groovy Gorilla)

Package: gbrowse
Architecture: all
Version: 2.56+dfsg-8
Multi-Arch: foreign
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 6998
Depends: perl:any, apache2 | httpd-cgi, bioperl, libbio-graphics-perl, libbio-coordinate-perl, libbio-db-seqfeature-perl, libcgi-session-perl, libgd-gd2-noxpm-perl | libgd-gd2-perl, libio-string-perl, libjson-perl, libstatistics-descriptive-perl, libwww-perl, libhttp-daemon-perl, libterm-readkey-perl, sqlite3, libdbd-sqlite3-perl, libjs-prototype, libjs-scriptaculous, libvm-ec2-perl, lsb-base
Recommends: apache2 (>= 2.4.6-4~) | httpd
Suggests: gbrowse-data, gbrowse-calign, libfile-nfslock-perl
Filename: pool/universe/g/gbrowse/gbrowse_2.56+dfsg-8_all.deb
Size: 2182324
MD5sum: fb9f9899c0217cb01f59bf7ca7a32010
SHA1: de222760977b1e2e2252462431f8ccb726074c21
SHA256: cb5cd470cdf3ee49034fe4c64baf6a380d45bc756a0aa0b3f3293daa9b8621ae
SHA512: ae9db17a2467b7ed6621294d943bd6a741debad4c8d3074a394d3e60556f22e5170a472c3147eb7f1e6da417941e4a6027618079640fb87eac5988f5947bcfb7
Homepage: http://gmod.org/wiki/GBrowse
Description-en: GMOD Generic Genome Browser
Generic Genome Browser is a simple but highly
configurable web-based genome browser. It is a component of the
Generic Model Organism Systems Database project (GMOD).
Some of its features:
* Simultaneous bird's eye and detailed views of the genome;
* Scroll, zoom, center;
* Attach arbitrary URLs to any annotation;
* Order and appearance of tracks are customizable by administrator and
end-user;
* Search by annotation ID, name, or comment;
* Supports third party annotation using GFF formats;
* Settings persist across sessions;
* DNA and GFF dumps;
* Connectivity to different databases, including BioSQL and Chado;
* Multi-language support;
* Third-party feature loading;
* Customizable plug-in architecture (e.g. run BLAST, dump & import many
formats, find oligonucleotides, design primers, create restriction maps,
edit features).
Description-md5: 0aa2912bfc190ad55fe33a0ecfc2aabe