How to Install and Uninstall snap-aligner Package on Ubuntu 16.04 LTS (Xenial Xerus)

Last updated: December 23,2024

1. Install "snap-aligner" package

This guide let you learn how to install snap-aligner on Ubuntu 16.04 LTS (Xenial Xerus)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                snap-aligner
            
                    
    
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2. Uninstall "snap-aligner" package

Please follow the step by step instructions below to uninstall snap-aligner on Ubuntu 16.04 LTS (Xenial Xerus):


    
        
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                sudo apt remove
            
                        
                snap-aligner
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the snap-aligner package on Ubuntu 16.04 LTS (Xenial Xerus)

Package: snap-aligner
Priority: optional
Section: universe/science
Installed-Size: 13430
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Architecture: amd64
Version: 0.18~1.0~beta.18+dfsg1-2
Depends: libc6 (>= 2.14), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.2)
Filename: pool/universe/s/snap-aligner/snap-aligner_0.18~1.0~beta.18+dfsg1-2_amd64.deb
Size: 1639162
MD5sum: c05d2d123cc733cff2d5ec45a96772c2
SHA1: d448348e1bfd586acd61722e3f5b70d9dc5b9342
SHA256: 24476bad84b3e2cee4a2c529529d3a0895557c6eb3b95af501e5058557447a00
Description-en: Scalable Nucleotide Alignment Program
SNAP is a new sequence aligner that is 3-20x faster and just as accurate as
existing tools like BWA-mem, Bowtie2 and Novoalign. It runs on commodity x86
processors, and supports a rich error model that lets it cheaply match reads
with more differences from the reference than other tools. This gives SNAP up
to 2x lower error rates than existing tools (in some cases) and lets it match
larger mutations that they may miss. SNAP also natively reads BAM, FASTQ, or
gzipped FASTQ, and natively writes SAM or BAM, with built-in sorting,
duplicate marking, and BAM indexing.
Description-md5: e1cd6bb8b6f6e28f36553bfa5a8636a5
Homepage: http://snap.cs.berkeley.edu/
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Origin: Ubuntu