How to Install and Uninstall snpomatic Package on Ubuntu 16.04 LTS (Xenial Xerus)

Last updated: December 28,2024

1. Install "snpomatic" package

This guide covers the steps necessary to install snpomatic on Ubuntu 16.04 LTS (Xenial Xerus)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                snpomatic
            
                    
    
    Copied

2. Uninstall "snpomatic" package

Please follow the instructions below to uninstall snpomatic on Ubuntu 16.04 LTS (Xenial Xerus):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                snpomatic
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the snpomatic package on Ubuntu 16.04 LTS (Xenial Xerus)

Package: snpomatic
Priority: optional
Section: universe/science
Installed-Size: 210
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Architecture: amd64
Version: 0.0.20151015-1
Depends: libc6 (>= 2.14), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2)
Filename: pool/universe/s/snpomatic/snpomatic_0.0.20151015-1_amd64.deb
Size: 84190
MD5sum: f345e6fad2082c24b1627d86ded5935d
SHA1: 181a3e71ac068ee7f1cdc6497b6a29506f402e72
SHA256: dd920872c0581c5686cfbd4ec97da22f5cbe536c5e4ae17248c565cbe88c1cf7
Description-en: fast, stringent short-read mapping software
High throughput sequencing technologies generate large amounts of short reads.
Mapping these to a reference sequence consumes large amounts of processing
time and memory, and read mapping errors can lead to noisy or incorrect
alignments.
.
SNP-o-matic is a fast, stringent short-read mapping software. It supports a
multitude of output types and formats, for uses in filtering reads, alignments,
sequence-based genotyping calls, assisted reassembly of contigs etc.
Description-md5: 50b0f5ca57c74cbaa893287c1d0a199d
Homepage: https://github.com/magnusmanske/snpomatic
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Origin: Ubuntu