How to Install and Uninstall snpomatic Package on Ubuntu 21.10 (Impish Indri)

Last updated: November 07,2024

1. Install "snpomatic" package

This guide covers the steps necessary to install snpomatic on Ubuntu 21.10 (Impish Indri)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                snpomatic
            
                    
    
    Copied

2. Uninstall "snpomatic" package

Please follow the steps below to uninstall snpomatic on Ubuntu 21.10 (Impish Indri):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                snpomatic
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the snpomatic package on Ubuntu 21.10 (Impish Indri)

Package: snpomatic
Architecture: amd64
Version: 1.0-5
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 213
Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2)
Filename: pool/universe/s/snpomatic/snpomatic_1.0-5_amd64.deb
Size: 83392
MD5sum: 51d01e86fa0c9f179ac4c64eca58165b
SHA1: 471e4efed3a21999cfb6adf0dc6b310d8a0c8f62
SHA256: 325f343fcf7dc69d0d0a078ccdceee318760da72bce36d6157f12f66058c962f
SHA512: b10764b7e18163a988f1c74b78c02f8622d8c1b18f68a2a65b6ca153649efcd7a16ec714c10ddaafd7a00ce6d6385cd9615042ecdd9d2202578e5c227b3687eb
Homepage: https://github.com/magnusmanske/snpomatic
Description-en: fast, stringent short-read mapping software
High throughput sequencing technologies generate large amounts of short reads.
Mapping these to a reference sequence consumes large amounts of processing
time and memory, and read mapping errors can lead to noisy or incorrect
alignments.
.
SNP-o-matic is a fast, stringent short-read mapping software. It supports a
multitude of output types and formats, for uses in filtering reads, alignments,
sequence-based genotyping calls, assisted reassembly of contigs etc.
Description-md5: 50b0f5ca57c74cbaa893287c1d0a199d