allelecount on AUR (Arch User Repository)

Last updated: May 17,2024

1. Install "allelecount" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
            $
        

        
            
                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
    Copied

b. Install allelecount on Arch using YAY


    
        
            $
        

        
            
                yay -S
            
                        
                allelecount
            
                    
    
    Copied

* (Optional) Uninstall allelecount on Arch using YAY


    
        
            $
        

        
            
                yay -Rns
            
                        
                allelecount
            
                    
    
    Copied

2. Manually Install "allelecount" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
            $
        

        
            
                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
    Copied

b. Clone allelecount's git locally


    
        
            $
        

        
            
                git clone https://aur.archlinux.org/allelecount.git 
            
                        
                ~/allelecount
            
                    
    
    Copied

c. Go to ~/allelecount folder and install it


   
    
        
            $
        

        
            
                cd
            
                        
                ~/allelecount
            
                    
    
    Copied

    

   
    
        
            $
        

        
            
                makepkg -si
            
                    
    
    Copied

3. Information about the allelecount package on Arch User Repository (AUR)

ID: 1255354
Name: allelecount
PackageBaseID: 193450
PackageBase: allelecount
Version: 4.3.0-1
Description: program for estimating the NGS copy number
URL: http://cancerit.github.io/alleleCount/
NumVotes: 0
Popularity: 0
OutOfDate:
Maintainer: kbipinkumar
Submitter: kbipinkumar
FirstSubmitted: 1683625878
LastModified: 1683625878
URLPath: /cgit/aur.git/snapshot/allelecount.tar.gz