How to Install and Uninstall allelecount Package on Ubuntu 21.10 (Impish Indri)

Last updated: December 23,2024

1. Install "allelecount" package

Please follow the instructions below to install allelecount on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                allelecount
            
                    
    
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2. Uninstall "allelecount" package

This is a short guide on how to uninstall allelecount on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                allelecount
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the allelecount package on Ubuntu 21.10 (Impish Indri)

Package: allelecount
Architecture: amd64
Version: 4.2.1-1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 89
Depends: libc6 (>= 2.7), libhts3 (>= 1.10)
Filename: pool/universe/a/allelecount/allelecount_4.2.1-1_amd64.deb
Size: 27924
MD5sum: 690b2ab3afe02bfd4e35e13d02373162
SHA1: 1977ae0346683e0168c11a8c7bec4dee86d76597
SHA256: aea0bed69b686dfd71d7877efbcdd1a70356dac10e9985a516a5439fd6e5a3b3
SHA512: 1b3ff8ab9f3b0b6d809ba3d9bd3d908c93c814d46910f58e12dc300d11fee106595bd9799a0ded4d086d9e56698e4b45c3e39f2652aa3bd5159355a2afdf5551
Homepage: https://github.com/cancerit/alleleCount
Description-en: NGS copy number algorithms
Support code for NGS copy number algorithms. Takes a file of locations
and a [cr|b]am file and generates a count of coverage of each allele
[ACGT] at that location (given any filter settings).
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The alleleCount package primarily exists to prevent code duplication
between some other projects, specifically AscatNGS and Battenberg.
Description-md5: f7d2421be2958c8e29f82e4a87bb26db