bbmap on AUR (Arch User Repository)

Last updated: November 22,2024

1. Install "bbmap" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
            $
        

        
            
                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
    Copied

b. Install bbmap on Arch using YAY

* (Optional) Uninstall bbmap on Arch using YAY

2. Manually Install "bbmap" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
            $
        

        
            
                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
    Copied

b. Clone bbmap's git locally


    
        
            $
        

        
            
                git clone https://aur.archlinux.org/bbmap.git 
            
                        
                ~/bbmap
            
                    
    
    Copied

c. Go to ~/bbmap folder and install it


   
    
        
            $
        

        
            
                cd
            
                        
                ~/bbmap
            
                    
    
    Copied

    

   
    
        
            $
        

        
            
                makepkg -si
            
                    
    
    Copied

3. Information about the bbmap package on Arch User Repository (AUR)

ID: 1409073
Name: bbmap
PackageBaseID: 128370
PackageBase: bbmap
Version: 39.06-3
Description: A short read aligner and other bioinformatic tools
URL: https://jgi.doe.gov/data-and-tools/bbtools/
NumVotes: 1
Popularity: 0
OutOfDate:
Maintainer: malacology
Submitter: clintval
FirstSubmitted: 1514187261
LastModified: 1707908811
URLPath: /cgit/aur.git/snapshot/bbmap.tar.gz