How to Install and Uninstall bbmap Package on Kali Linux

Last updated: November 07,2024

1. Install "bbmap" package

Please follow the guidance below to install bbmap on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                bbmap
            
                    
    
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2. Uninstall "bbmap" package

This tutorial shows how to uninstall bbmap on Kali Linux:


    
        
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                sudo apt remove
            
                        
                bbmap
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the bbmap package on Kali Linux

Package: bbmap
Version: 39.06+dfsg-1
Installed-Size: 10553
Maintainer: Debian Med Packaging Team
Architecture: all
Provides: bbtools
Depends: libmpj-java, openjdk-17-jre-headless | java-runtime-headless
Recommends: pigz
Size: 9925076
SHA256: b0b6a5f8ac815dc189f8bffd73a87586458bd21be20b7a71497c42fc9ae879a4
SHA1: 9482503ac8dd40f543eeb50a56555850161815ae
MD5sum: fe97f5c69c668b786b7abe6e5f86f996
Description: BBTools genomic aligner and other tools for short sequences
The BBTools are a collection of small programs to solve recurrent
tasks for the creative handling of short biological RNA/DNA sequences.
This suite may be best known for its mapper, which is also the name of
the project on sourceforge, but several tools have been added over time.
All tools are multi-threaded, implemented platform-independently in Java:
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BBMap: Short read aligner for DNA and RNA-seq data. Capable of handling
arbitrarily large genomes with millions of scaffolds. Handles Illumina,
PacBio, 454, and other reads; very high sensitivity and tolerant of
errors and numerous large indels.
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BBNorm: Kmer-based error-correction and normalization tool.
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Dedupe: Simplifies assemblies by removing duplicate or contained
subsequences that share a target percent identity.
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Reformat: Reformats reads between fasta/fastq/scarf/fasta+qual/sam,
interleaved/paired, and ASCII-33/64, at over 500 MB/s.
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BBDuk: Filters, trims, or masks reads with kmer matches to an
artifact/contaminant file.
Description-md5:
Homepage: https://sourceforge.net/projects/bbmap/
Section: science
Priority: optional
Filename: pool/main/b/bbmap/bbmap_39.06+dfsg-1_all.deb