salmon on AUR (Arch User Repository)

Last updated: December 23,2024

1. Install "salmon" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
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                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
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b. Install salmon on Arch using YAY

* (Optional) Uninstall salmon on Arch using YAY

2. Manually Install "salmon" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
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                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
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b. Clone salmon's git locally


    
        
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                git clone https://aur.archlinux.org/salmon.git 
            
                        
                ~/salmon
            
                    
    
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c. Go to ~/salmon folder and install it


   
    
        
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                cd
            
                        
                ~/salmon
            
                    
    
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                makepkg -si
            
                    
    
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3. Information about the salmon package on Arch User Repository (AUR)

ID: 1428011
Name: salmon
PackageBaseID: 135485
PackageBase: salmon
Version: 1.10.3-1
Description: Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using lightweight alignments
URL: https://combine-lab.github.io/salmon/
NumVotes: 0
Popularity: 0
OutOfDate:
Maintainer: kbipinkumar
Submitter: tmiller
FirstSubmitted: 1535527875
LastModified: 1710547573
URLPath: /cgit/aur.git/snapshot/salmon.tar.gz