How to Install and Uninstall salmon Package on Kali Linux

Last updated: November 07,2024

1. Install "salmon" package

Please follow the steps below to install salmon on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                salmon
            
                    
    
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2. Uninstall "salmon" package

Please follow the instructions below to uninstall salmon on Kali Linux:


    
        
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                sudo apt remove
            
                        
                salmon
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the salmon package on Kali Linux

Package: salmon
Source: salmon (1.10.2+ds1-1)
Version: 1.10.2+ds1-1+b1
Installed-Size: 12225
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libboost-filesystem1.83.0 (>= 1.83.0), libboost-iostreams1.83.0 (>= 1.83.0), libboost-program-options1.83.0 (>= 1.83.0), libc6 (>= 2.34), libgcc-s1 (>= 3.4), libjemalloc2 (>= 5.0.0), libstaden-read14 (>= 1.14.12), libstdc++6 (>= 13.1), libtbb12 (>= 2021.4.0), libtbbmalloc2 (>= 2017~U7), zlib1g (>= 1:1.1.4), libjs-sphinxdoc (>= 7.2.2)
Size: 3267264
SHA256: 0608724d54505c8d1cbcdb77b0d4cecc40c0aa403d18952f872336b3affc895d
SHA1: b69af99f195a31b0af361cd5289b6d2b5de99f85
MD5sum: 78516cecb8ee65a4392e60e1fb6f14aa
Description: wicked-fast transcript quantification from RNA-seq data
Salmon is a wicked-fast program to produce a highly-accurate, transcript-level
quantification estimates from RNA-seq data. Salmon achieves is accuracy and
speed via a number of different innovations, including the use of lightweight
alignments (accurate but fast-to-compute proxies for traditional read
alignments) and massively-parallel stochastic collapsed variational inference.
The result is a versatile tool that fits nicely into many different pipelines.
For example, you can choose to make use of the lightweight alignments by
providing Salmon with raw sequencing reads, or, if it is more convenient, you
can provide Salmon with regular alignments (e.g. computed with your favorite
aligner), and it will use the same wicked-fast, state-of-the-art inference
algorithm to estimate transcript-level abundances for your experiment.
Description-md5:
Homepage: https://github.com/COMBINE-lab/salmon
Built-Using: sphinx (= 7.2.6-2)
Section: science
Priority: optional
Filename: pool/main/s/salmon/salmon_1.10.2+ds1-1+b1_amd64.deb