How to Install and Uninstall bioperl-run Package on Debian 12 (Bookworm)

Last updated: December 23,2024

You can also install and uninstall the bioperl-run on the following distributions in the same way, as they are all based on the Debian system

MX Linux 23
SparkyLinux

1. Install "bioperl-run" package

This is a short guide on how to install bioperl-run on Debian 12 (Bookworm)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                bioperl-run
            
                    
    
    Copied

2. Uninstall "bioperl-run" package

This is a short guide on how to uninstall bioperl-run on Debian 12 (Bookworm):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                bioperl-run
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the bioperl-run package on Debian 12 (Bookworm)

Package: bioperl-run
Version: 1.7.3-9
Installed-Size: 93
Maintainer: Debian Med Packaging Team
Architecture: all
Depends: perl:any, bioperl (>= 1.7.4), libbio-perl-run-perl (= 1.7.3-9), libbio-tools-run-alignment-clustalw-perl, libbio-featureio-perl, libbio-cluster-perl, libtest-requiresinternet-perl, libbio-eutilities-perl, libbio-tools-run-remoteblast-perl, libsoap-lite-perl, default-jdk-headless, hyphy-pt | hyphy-mpi
Recommends: amap-align, bedtools, ncbi-blast+-legacy, bowtie, bwa, clustalw, emboss, exonerate, hmmer, infernal, kalign, maq, mafft, muscle, ncoils, phylip, phyml, primer3, probalign, probcons, raxml, samtools, sim4, t-coffee, tigr-glimmer, wise, lagan, pal2nal, pftools
Suggests: gmap, fasta3, trnascan-se
Description: BioPerl wrappers: scripts
Description-md5: 7ae0a3a7ce278987fe66fde47a91ee2f
Homepage: https://metacpan.org/release/BioPerl-Run
Tag: field::biology, field::biology:bioinformatics, implemented-in::perl,
interface::commandline, role::program
Section: science
Priority: optional
Filename: pool/main/b/bioperl-run/bioperl-run_1.7.3-9_all.deb
Size: 40556
MD5sum: 3f537a76dbd5fae673fcfb43bd34c6d8
SHA256: 38e044bf99449c8c54cf82786d775f7263124504767b2939890fd68a189ffb23