How to Install and Uninstall bioperl-run Package on Ubuntu 21.10 (Impish Indri)

Last updated: December 27,2024

1. Install "bioperl-run" package

Here is a brief guide to show you how to install bioperl-run on Ubuntu 21.10 (Impish Indri)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                bioperl-run
            
                    
    
    Copied

2. Uninstall "bioperl-run" package

Please follow the guidance below to uninstall bioperl-run on Ubuntu 21.10 (Impish Indri):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                bioperl-run
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the bioperl-run package on Ubuntu 21.10 (Impish Indri)

Package: bioperl-run
Architecture: all
Version: 1.7.3-6
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 90
Depends: perl:any, bioperl (>= 1.7.4), libbio-perl-run-perl (= 1.7.3-6), libbio-tools-run-alignment-clustalw-perl, libbio-featureio-perl, libbio-cluster-perl, libtest-requiresinternet-perl, libbio-eutilities-perl, libbio-tools-run-remoteblast-perl, default-jdk-headless, hyphy-pt | hyphy-mpi
Recommends: amap-align, bedtools, ncbi-blast+-legacy, bowtie, bwa, clustalw, emboss, exonerate, hmmer, infernal, kalign, maq, mafft, muscle, ncoils, phylip, phyml, primer3, probalign, probcons, raxml, samtools, sim4, t-coffee, tigr-glimmer, wise, lagan, pal2nal, pftools
Suggests: gmap, fasta3, trnascan-se
Filename: pool/universe/b/bioperl-run/bioperl-run_1.7.3-6_all.deb
Size: 35312
MD5sum: 7582e7fba0376a37ffc4a50b9c70969a
SHA1: 6fb56cbeff2966069f2b700fa180424a79a4d37f
SHA256: 0835ca0ef69568c319332c80d66b6ff1b0db0e59feb0277f2977b89ca0b712a0
SHA512: 19e415740a2b655f837e4874922d7549edcb6e4a57f3fb4f770548db6d573522fd8111fdf88bdeac7694927aa4fe8589016248a7d7feaa864bae8177df527f94
Homepage: https://metacpan.org/release/BioPerl-Run
Description-en: BioPerl wrappers: scripts
Contains scripts from the BioPerl-Run package. This package will also install
all wrappable applications packaged in Debian. The ones that are not Free are
"Suggested" by this package.
Description-md5: 7ae0a3a7ce278987fe66fde47a91ee2f