nanopolish on Debian 11 (Bullseye)

Last updated: September 14,2022

1. Install nanopolish package

Please follow the guidance below to install nanopolish package:

sudo apt update

sudo apt install nanopolish

2. Uninstall / Remove nanopolish package

This is a short guide on how to uninstall nanopolish package:

sudo apt remove nanopolish

sudo apt autoclean && sudo apt autoremove

3. Details of nanopolish package

Package: nanopolish

Version: 0.13.2-3

Installed-Size: 9539

Maintainer: Debian Med Packaging Team 

Architecture: amd64

Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.3.1), libgomp1 (>= 6), libhdf5-103-1, libhts3 (>= 1.10), libstdc++6 (>= 9), zlib1g (>= 1:1.1.4), python3:any, perl:any

Recommends: python3-biopython, python3-pysam

Suggests: perl, make

Description: consensus caller for nanopore sequencing data

Description-md5: c65181cb6cafc3c3d9c0c69affe72640

Homepage: https://github.com/jts/nanopolish

Section: science

Priority: optional

Filename: pool/main/n/nanopolish/nanopolish_0.13.2-3_amd64.deb

Size: 2252628

MD5sum: 20745aaa8af227a46eb7fd3c57757101

SHA256: 352e33dc177510301efb5a9750d399b0d670894aa28ee75942484dbe9101a17e