How to Install and Uninstall cct Package on Kali Linux

Last updated: November 06,2024

1. Install "cct" package

Please follow the steps below to install cct on Kali Linux


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                cct
            
                    
    
    Copied

2. Uninstall "cct" package

This tutorial shows how to uninstall cct on Kali Linux:


    
        
            $
        

        
            
                sudo apt remove
            
                        
                cct
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the cct package on Kali Linux

Package: cct
Version: 1:1.0.3-1
Installed-Size: 35963
Maintainer: Debian Med Packaging Team
Architecture: all
Depends: perl:any, bioperl, cgview, ncbi-blast+-legacy, imagemagick | graphicsmagick, liberror-perl, libtie-ixhash-perl, libwww-perl
Size: 36332512
SHA256: 24256b211d59279b897555cd867a771fe9c82f059269dd18719648cc41849941
SHA1: 81050d7dffccbfb761a7d555c43b835aa3f9d3d2
MD5sum: 410dede1968d229a3216b7908e94a50f
Description: visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences
The CGView Comparison Tool (CCT) is a package for visually comparing
bacterial, plasmid, chloroplast, or mitochondrial sequences of interest
to existing genomes or sequence collections. The comparisons are
conducted using BLAST, and the BLAST results are presented in the form
of graphical maps that can also show sequence features, gene and protein
names, COG category assignments, and sequence composition
characteristics. CCT can generate maps in a variety of sizes, including
400 Megapixel maps suitable for posters. Comparisons can be conducted
within a particular species or genus, or all available genomes can be
used. The entire map creation process, from downloading sequences to
redrawing zoomed maps, can be completed easily using scripts included
with the CCT. User-defined features or analysis results can be included
on maps, and maps can be extensively customized. To simplify program
setup, a CCT virtual machine that includes all dependencies preinstalled
is available. Detailed tutorials illustrating the use of CCT are
included with the CCT documentation.
Description-md5:
Homepage: http://stothard.afns.ualberta.ca/downloads/CCT/
Section: science
Priority: optional
Filename: pool/main/c/cct/cct_1.0.3-1_all.deb