How to Install and Uninstall centrifuge Package on Kali Linux

Last updated: November 22,2024

1. Install "centrifuge" package

Please follow the guidelines below to install centrifuge on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                centrifuge
            
                    
    
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2. Uninstall "centrifuge" package

Please follow the guidance below to uninstall centrifuge on Kali Linux:


    
        
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                sudo apt remove
            
                        
                centrifuge
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the centrifuge package on Kali Linux

Package: centrifuge
Version: 1.0.3-11
Installed-Size: 1663
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libstdc++6 (>= 11), python3:any, python3, hisat2, jellyfish
Size: 554328
SHA256: 016f9f6c5657569c5e096865f8f453f9090b4572dd9ff9c285ae120d298d7f34
SHA1: 092d26267b1a6fb77ba374eddc66baa9e6ac5938
MD5sum: 9b95eb833c32e501f3eb858fff7bc1ba
Description: rapid and memory-efficient system for classification of DNA sequences
Centrifuge is a very rapid and memory-efficient system for the
classification of DNA sequences from microbial samples, with better
sensitivity than and comparable accuracy to other leading systems. The
system uses a novel indexing scheme based on the Burrows-Wheeler
transform (BWT) and the Ferragina-Manzini (FM) index, optimized
specifically for the metagenomic classification problem. Centrifuge
requires a relatively small index (e.g., 4.3 GB for ~4,100 bacterial
genomes) yet provides very fast classification speed, allowing it to
process a typical DNA sequencing run within an hour. Together these
advances enable timely and accurate analysis of large metagenomics data
sets on conventional desktop computers.
Description-md5:
Homepage: https://ccb.jhu.edu/software/centrifuge/
Section: science
Priority: optional
Filename: pool/main/c/centrifuge/centrifuge_1.0.3-11_amd64.deb