How to Install and Uninstall changeo Package on Kali Linux

Last updated: May 13,2024

Deprecated! Installation of this package may no longer be supported.

1. Install "changeo" package

This tutorial shows how to install changeo on Kali Linux


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                changeo
            
                    
    
    Copied

2. Uninstall "changeo" package

Please follow the steps below to uninstall changeo on Kali Linux:


    
        
            $
        

        
            
                sudo apt remove
            
                        
                changeo
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the changeo package on Kali Linux

Package: changeo
Version: 1.3.0-1
Installed-Size: 701
Maintainer: Debian Med Packaging Team
Architecture: all
Depends: python3-airr, python3-biopython, python3-numpy, python3-pandas, python3-pkg-resources, python3-presto, python3-scipy, python3-yaml, python3:any
Recommends: python3-presto (>= 0.6.2)
Size: 107944
SHA256: 1f71f06d5685bda2d58eb69453c90cf2ec6c22f3beea459080dcb13a86612121
SHA1: a20c1abd41091fbf5fb5b3405a128c6250e8f829
MD5sum: 82cf5803987d3415c6860458241854ef
Description: Repertoire clonal assignment toolkit (Python 3)
Change-O is a collection of tools for processing the output of V(D)J
alignment tools, assigning clonal clusters to immunoglobulin (Ig)
sequences, and reconstructing germline sequences.
.
Dramatic improvements in high-throughput sequencing technologies now
enable large-scale characterization of Ig repertoires, defined as the
collection of trans-membrane antigen-receptor proteins located on the
surface of B cells and T cells. Change-O is a suite of utilities to
facilitate advanced analysis of Ig and TCR sequences following germline
segment assignment. Change-O handles output from IMGT/HighV-QUEST
and IgBLAST, and provides a wide variety of clustering methods for
assigning clonal groups to Ig sequences. Record sorting, grouping,
and various database manipulation operations are also included.
.
This package installs the library for Python 3.
Description-md5:
Homepage: https://changeo.readthedocs.io
Section: science
Priority: optional
Filename: pool/main/c/changeo/changeo_1.3.0-1_all.deb