How to Install and Uninstall estscan Package on Kali Linux
Last updated: December 24,2024
1. Install "estscan" package
Please follow the steps below to install estscan on Kali Linux
$
sudo apt update
Copied
$
sudo apt install
estscan
Copied
2. Uninstall "estscan" package
In this section, we are going to explain the necessary steps to uninstall estscan on Kali Linux:
$
sudo apt remove
estscan
Copied
$
sudo apt autoclean && sudo apt autoremove
Copied
3. Information about the estscan package on Kali Linux
Package: estscan
Version: 3.0.3-6
Installed-Size: 257
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.29), libgfortran5 (>= 8), perl:any
Size: 53724
SHA256: 597c72086b830e0dba017de21f79a059204f602ea46853952c5ed0385abc164b
SHA1: 6402dd9285864be08fa1b84a82e9aecbdcd1d482
MD5sum: f3e62e53c6211d5bc1170347130bd671
Description: ORF-independent detector of coding DNA sequences
ESTScan is a program that can detect coding regions in DNA sequences,
even if they are of low quality. ESTScan will also detect and correct
sequencing errors that lead to frameshifts. ESTScan is not a gene
prediction program , nor is it an open reading frame detector. In fact,
its strength lies in the fact that it does not require an open reading
frame to detect a coding region. As a result, the program may miss a
few translated amino acids at either the N or the C terminus, but will
detect coding regions with high selectivity and sensitivity.
.
ESTScan takes advantages of the bias in hexanucleotide usage found in
coding regions relative to non-coding regions. This bias is formalized
as an inhomogeneous 3-periodic fifth-order Hidden Markov Model
(HMM). Additionally, the HMM of ESTScan has been extended to allows
insertions and deletions when these improve the coding region statistics.
Description-md5:
Homepage: http://estscan.sourceforge.net/
Section: science
Priority: optional
Filename: pool/main/e/estscan/estscan_3.0.3-6_amd64.deb
Version: 3.0.3-6
Installed-Size: 257
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.29), libgfortran5 (>= 8), perl:any
Size: 53724
SHA256: 597c72086b830e0dba017de21f79a059204f602ea46853952c5ed0385abc164b
SHA1: 6402dd9285864be08fa1b84a82e9aecbdcd1d482
MD5sum: f3e62e53c6211d5bc1170347130bd671
Description: ORF-independent detector of coding DNA sequences
ESTScan is a program that can detect coding regions in DNA sequences,
even if they are of low quality. ESTScan will also detect and correct
sequencing errors that lead to frameshifts. ESTScan is not a gene
prediction program , nor is it an open reading frame detector. In fact,
its strength lies in the fact that it does not require an open reading
frame to detect a coding region. As a result, the program may miss a
few translated amino acids at either the N or the C terminus, but will
detect coding regions with high selectivity and sensitivity.
.
ESTScan takes advantages of the bias in hexanucleotide usage found in
coding regions relative to non-coding regions. This bias is formalized
as an inhomogeneous 3-periodic fifth-order Hidden Markov Model
(HMM). Additionally, the HMM of ESTScan has been extended to allows
insertions and deletions when these improve the coding region statistics.
Description-md5:
Homepage: http://estscan.sourceforge.net/
Section: science
Priority: optional
Filename: pool/main/e/estscan/estscan_3.0.3-6_amd64.deb