How to Install and Uninstall gasic Package on Kali Linux

Last updated: November 23,2024

Deprecated! Installation of this package may no longer be supported.

1. Install "gasic" package

Here is a brief guide to show you how to install gasic on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                gasic
            
                    
    
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2. Uninstall "gasic" package

Please follow the steps below to uninstall gasic on Kali Linux:


    
        
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                sudo apt remove
            
                        
                gasic
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the gasic package on Kali Linux

Package: gasic
Version: 0.0.r19-8
Installed-Size: 80
Maintainer: Debian Med Packaging Team
Architecture: all
Depends: python3:any, python3-scipy, python3-numpy, python3-biopython, python3-pysam, python3-matplotlib, bowtie, bowtie2, bwa, seqan-apps
Suggests: gasic-examples
Size: 20644
SHA256: 22c8ca3d072ba0b75eaa3130492b341f3ed7df9f75475788213089939527491f
SHA1: cb6d83f1b825c36911cf9814c36a59751b59fd1d
MD5sum: d0b3781f6202360b7374c87656d0680b
Description: genome abundance similarity correction
One goal of sequencing based metagenomic analysis is the quantitative
taxonomic assessment of microbial community compositions. However, the
majority of approaches either quantify at low resolution (e.g. at phylum
level) or have severe problems discerning highly similar species. Yet,
accurate quantification on species level is desirable in applications
such as metagenomic diagnostics or community comparison. GASiC is a
method to correct read alignment results for the ambiguities imposed by
similarities of genomes. It has superior performance over existing
methods.
Description-md5:
Homepage: http://sourceforge.net/projects/gasic/
Section: science
Priority: optional
Filename: pool/main/g/gasic/gasic_0.0.r19-8_all.deb