How to Install and Uninstall jellyfish1 Package on Kali Linux

Last updated: May 20,2024

1. Install "jellyfish1" package

Please follow the step by step instructions below to install jellyfish1 on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                jellyfish1
            
                    
    
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2. Uninstall "jellyfish1" package

This is a short guide on how to uninstall jellyfish1 on Kali Linux:


    
        
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                sudo apt remove
            
                        
                jellyfish1
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the jellyfish1 package on Kali Linux

Package: jellyfish1
Version: 1.1.11-9
Installed-Size: 651
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libstdc++6 (>= 13.1)
Enhances: kraken
Size: 132312
SHA256: 52c1511cfa85491cd0fc7a15d6c8d1b94ae6bccbebc7565e83b60ec4d515f3ff
SHA1: f3487c85073bc4af5949928636a71f842c2a5a9f
MD5sum: a06665f7277eea2954c41ce90e8df68a
Description: count k-mers in DNA sequences
JELLYFISH is a tool for fast, memory-efficient counting of k-mers in
DNA. A k-mer is a substring of length k, and counting the occurrences
of all such substrings is a central step in many analyses of DNA
sequence. JELLYFISH can count k-mers using an order of magnitude less
memory and an order of magnitude faster than other k-mer counting
packages by using an efficient encoding of a hash table and by
exploiting the "compare-and-swap" CPU instruction to increase
parallelism.
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JELLYFISH is a command-line program that reads FASTA and multi-FASTA
files containing DNA sequences. It outputs its k-mer counts in an
binary format, which can be translated into a human-readable text
format using the "jellyfish dump" command.
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This is the latest version of the 1.x series of jellyfish which is
used by some other applications that are not compatible with version
2.x which is provided inside the jellyfish package.
Description-md5:
Homepage: https://www.cbcb.umd.edu/software/jellyfish/
Section: science
Priority: optional
Filename: pool/main/j/jellyfish1/jellyfish1_1.1.11-9_amd64.deb