How to Install and Uninstall r-bioc-megadepth Package on Kali Linux

Last updated: November 07,2024

1. Install "r-bioc-megadepth" package

Please follow the steps below to install r-bioc-megadepth on Kali Linux


    
        
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                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                r-bioc-megadepth
            
                    
    
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2. Uninstall "r-bioc-megadepth" package

Please follow the guidance below to uninstall r-bioc-megadepth on Kali Linux:


    
        
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                sudo apt remove
            
                        
                r-bioc-megadepth
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the r-bioc-megadepth package on Kali Linux

Package: r-bioc-megadepth
Version: 1.12.0+ds-2
Installed-Size: 165
Maintainer: Debian R Packages Maintainers
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.18, r-cran-xfun, r-cran-fs, r-bioc-genomicranges, r-cran-readr, r-cran-cmdfun, r-cran-dplyr, r-cran-magrittr, megadepth
Suggests: r-cran-covr, r-cran-knitr, r-bioc-biocstyle, r-cran-sessioninfo, r-cran-rmarkdown, r-bioc-rtracklayer, r-bioc-genomeinfodb, r-cran-testthat
Size: 85028
SHA256: cc6ce91bde2e150f10a13435b7848868ffd8fdb974fc5075f03dde8bc8e8db24
SHA1: 0ef27edc705d0afaa667e30fc7fadc8406119ecd
MD5sum: 6b804bc281542545dc6c34cc513a1094
Description: BioCOnductor BigWig and BAM related utilities
This package provides an R interface to Megadepth by Christopher
Wilks available at https://github.com/ChristopherWilks/megadepth. It is
particularly useful for computing the coverage of a set of genomic regions
across bigWig or BAM files. With this package, you can build base-pair
coverage matrices for regions or annotations of your choice from BigWig
files. Megadepth was used to create the raw files provided by
https://bioconductor.org/packages/recount3.
Description-md5:
Homepage: https://bioconductor.org/packages/megadepth/
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-megadepth/r-bioc-megadepth_1.12.0+ds-2_all.deb