How to Install and Uninstall r-bioc-tfbstools Package on Kali Linux
Last updated: January 10,2025
1. Install "r-bioc-tfbstools" package
In this section, we are going to explain the necessary steps to install r-bioc-tfbstools on Kali Linux
$
sudo apt update
Copied
$
sudo apt install
r-bioc-tfbstools
Copied
2. Uninstall "r-bioc-tfbstools" package
This guide let you learn how to uninstall r-bioc-tfbstools on Kali Linux:
$
sudo apt remove
r-bioc-tfbstools
Copied
$
sudo apt autoclean && sudo apt autoremove
Copied
3. Information about the r-bioc-tfbstools package on Kali Linux
Package: r-bioc-tfbstools
Version: 1.40.0+dfsg-1
Installed-Size: 1841
Maintainer: Debian R Packages Maintainers
Architecture: amd64
Depends: r-api-4.0, r-api-bioc-3.18, r-bioc-biobase (>= 2.28), r-bioc-biostrings (>= 2.36.4), r-bioc-biocgenerics (>= 0.14.0), r-bioc-biocparallel (>= 1.2.21), r-bioc-bsgenome (>= 1.36.3), r-cran-catools (>= 1.17.1), r-bioc-cner (>= 1.4.0), r-bioc-dirichletmultinomial (>= 1.10.0), r-bioc-genomeinfodb (>= 1.6.1), r-bioc-genomicranges (>= 1.20.6), r-cran-gtools (>= 3.5.0), r-bioc-iranges (>= 2.2.7), r-cran-dbi (>= 0.6), r-cran-rsqlite (>= 1.0.0), r-bioc-rtracklayer (>= 1.28.10), r-bioc-seqlogo (>= 1.34.0), r-bioc-s4vectors (>= 0.9.25), r-cran-tfmpvalue (>= 0.0.5), r-cran-xml (>= 3.98-1.3), r-bioc-xvector (>= 0.8.0), libc6 (>= 2.4)
Suggests: r-bioc-biocstyle (>= 1.7.7), r-cran-knitr (>= 1.11), r-cran-testthat, r-cran-rmarkdown
Size: 1003560
SHA256: bada46997fb6904e380ec575e6f43f688d7ecd08dc2c36b2c77ae680f2a7e6fa
SHA1: 3cc549f1ad6cf1463979ee5aa6a4439ac6a41eb8
MD5sum: 243097ed6e36be033c2a0c25540a9069
Description: GNU R Transcription Factor Binding Site (TFBS) Analysis
TFBSTools is a package for the analysis and manipulation of
transcription factor binding sites. It includes matrices conversion
between Position Frequency Matirx (PFM), Position Weight Matirx (PWM)
and Information Content Matrix (ICM). It can also scan putative TFBS
from sequence/alignment, query JASPAR database and provides a wrapper of
de novo motif discovery software.
Description-md5:
Homepage: https://bioconductor.org/packages/TFBSTools/
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-tfbstools/r-bioc-tfbstools_1.40.0+dfsg-1_amd64.deb
Version: 1.40.0+dfsg-1
Installed-Size: 1841
Maintainer: Debian R Packages Maintainers
Architecture: amd64
Depends: r-api-4.0, r-api-bioc-3.18, r-bioc-biobase (>= 2.28), r-bioc-biostrings (>= 2.36.4), r-bioc-biocgenerics (>= 0.14.0), r-bioc-biocparallel (>= 1.2.21), r-bioc-bsgenome (>= 1.36.3), r-cran-catools (>= 1.17.1), r-bioc-cner (>= 1.4.0), r-bioc-dirichletmultinomial (>= 1.10.0), r-bioc-genomeinfodb (>= 1.6.1), r-bioc-genomicranges (>= 1.20.6), r-cran-gtools (>= 3.5.0), r-bioc-iranges (>= 2.2.7), r-cran-dbi (>= 0.6), r-cran-rsqlite (>= 1.0.0), r-bioc-rtracklayer (>= 1.28.10), r-bioc-seqlogo (>= 1.34.0), r-bioc-s4vectors (>= 0.9.25), r-cran-tfmpvalue (>= 0.0.5), r-cran-xml (>= 3.98-1.3), r-bioc-xvector (>= 0.8.0), libc6 (>= 2.4)
Suggests: r-bioc-biocstyle (>= 1.7.7), r-cran-knitr (>= 1.11), r-cran-testthat, r-cran-rmarkdown
Size: 1003560
SHA256: bada46997fb6904e380ec575e6f43f688d7ecd08dc2c36b2c77ae680f2a7e6fa
SHA1: 3cc549f1ad6cf1463979ee5aa6a4439ac6a41eb8
MD5sum: 243097ed6e36be033c2a0c25540a9069
Description: GNU R Transcription Factor Binding Site (TFBS) Analysis
TFBSTools is a package for the analysis and manipulation of
transcription factor binding sites. It includes matrices conversion
between Position Frequency Matirx (PFM), Position Weight Matirx (PWM)
and Information Content Matrix (ICM). It can also scan putative TFBS
from sequence/alignment, query JASPAR database and provides a wrapper of
de novo motif discovery software.
Description-md5:
Homepage: https://bioconductor.org/packages/TFBSTools/
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-tfbstools/r-bioc-tfbstools_1.40.0+dfsg-1_amd64.deb