How to Install and Uninstall r-bioc-tfbstools Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: April 29,2024

1. Install "r-bioc-tfbstools" package

Please follow the instructions below to install r-bioc-tfbstools on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                r-bioc-tfbstools
            
                    
    
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2. Uninstall "r-bioc-tfbstools" package

Learn how to uninstall r-bioc-tfbstools on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                r-bioc-tfbstools
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the r-bioc-tfbstools package on Ubuntu 20.10 (Groovy Gorilla)

Package: r-bioc-tfbstools
Architecture: amd64
Version: 1.26.0+dfsg-1build1
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 1945
Depends: r-base-core (>= 4.0.0.20200528-1), r-api-4.0, r-api-bioc-3.11, r-bioc-biobase (>= 2.28), r-bioc-biostrings (>= 2.36.4), r-bioc-biocgenerics (>= 0.14.0), r-bioc-biocparallel (>= 1.2.21), r-bioc-bsgenome (>= 1.36.3), r-cran-catools (>= 1.17.1), r-bioc-cner (>= 1.4.0), r-bioc-dirichletmultinomial (>= 1.10.0), r-bioc-genomeinfodb (>= 1.6.1), r-bioc-genomicranges (>= 1.20.6), r-cran-gtools (>= 3.5.0), r-bioc-iranges (>= 2.2.7), r-cran-dbi (>= 0.6), r-cran-rsqlite (>= 1.0.0), r-bioc-rtracklayer (>= 1.28.10), r-bioc-seqlogo (>= 1.34.0), r-bioc-s4vectors (>= 0.9.25), r-cran-tfmpvalue (>= 0.0.5), r-cran-xml (>= 3.98-1.3), r-bioc-xvector (>= 0.8.0), libc6 (>= 2.4)
Recommends: r-cran-testthat
Suggests: r-cran-knitr (>= 1.11)
Filename: pool/universe/r/r-bioc-tfbstools/r-bioc-tfbstools_1.26.0+dfsg-1build1_amd64.deb
Size: 1094260
MD5sum: 8fe6f5f0b2ff59a0ca0f16ff63c50b58
SHA1: 3b424dafc1c46b731f52beef3842b3881cf54f1a
SHA256: 6874b3e11f843fbbc36099f72ea600844021a3d3635f073f1d6f52bfad4a9926
SHA512: 9aea0bad34e6fe54360981ca1a1d114739c6a16d6b537182977c2528d2eaecdf6d2a085df2053c084ed74a07e881f33508c3127fb5b0f1581910eb647c8bd879
Homepage: https://bioconductor.org/packages/TFBSTools/
Description-en: GNU R Transcription Factor Binding Site (TFBS) Analysis
TFBSTools is a package for the analysis and manipulation of
transcription factor binding sites. It includes matrices conversion
between Position Frequency Matirx (PFM), Position Weight Matirx (PWM)
and Information Content Matrix (ICM). It can also scan putative TFBS
from sequence/alignment, query JASPAR database and provides a wrapper of
de novo motif discovery software.
Description-md5: 50e2d45d8eaf57895dd9d09ce4967d52