How to Install and Uninstall ragout Package on Kali Linux

Last updated: December 23,2024

1. Install "ragout" package

This tutorial shows how to install ragout on Kali Linux


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                ragout
            
                    
    
    Copied

2. Uninstall "ragout" package

This tutorial shows how to uninstall ragout on Kali Linux:


    
        
            $
        

        
            
                sudo apt remove
            
                        
                ragout
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the ragout package on Kali Linux

Package: ragout
Version: 2.3-5
Installed-Size: 9659
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libstdc++6 (>= 13.1), python3:any, python3-networkx, python3-six
Recommends: sibelia
Size: 2122640
SHA256: 617e5a16b2fefc5cc4cc319a056e0ba57ea893aafa5e272e0f8d57e520e294ec
SHA1: 5d1327e5a94310019c0eb7cf61980154dd6a5413
MD5sum: 51eabc48199ffccd68da416b55ac2a58
Description: Reference-Assisted Genome Ordering UTility
Ragout (Reference-Assisted Genome Ordering UTility) is a tool for
chromosome-level scaffolding using multiple references. Given initial
assembly fragments (contigs/scaffolds) and one or multiple related
references (complete or draft), it produces a chromosome-scale assembly
(as a set of scaffolds).
.
The approach is based on the analysis of genome rearrangements (like
inversions or chromosomal translocations) between the input genomes and
reconstructing the most parsimonious structure of the target genome.
.
Ragout now supports both small and large genomes (of mammalian scale
and complexity). The assembly of highly polymorphic genomes is
currently limited.
Description-md5:
Homepage: https://github.com/fenderglass/Ragout/
Section: science
Priority: optional
Filename: pool/main/r/ragout/ragout_2.3-5_amd64.deb