How to Install and Uninstall sumtrees Package on Kali Linux
Last updated: November 22,2024
1. Install "sumtrees" package
This is a short guide on how to install sumtrees on Kali Linux
$
sudo apt update
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$
sudo apt install
sumtrees
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2. Uninstall "sumtrees" package
This is a short guide on how to uninstall sumtrees on Kali Linux:
$
sudo apt remove
sumtrees
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$
sudo apt autoclean && sudo apt autoremove
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3. Information about the sumtrees package on Kali Linux
Package: sumtrees
Source: python-dendropy
Version: 4.6.1-1
Installed-Size: 1882
Maintainer: Debian Med Packaging Team
Architecture: all
Depends: python3:any, python3-dendropy
Size: 184572
SHA256: 6209ffe6ac92cd1a0317939a8ce293a6816a15cd5aedf9f6d1ec416b7de50e25
SHA1: d708ea0d74fc5c2e2d2633867aac793e0035ea25
MD5sum: c9fca40e14762ed7c5e16e0df9a562ac
Description: Phylogenetic Tree Summarization and Annotation
SumTrees is a program to summarize non-parameteric bootstrap or
Bayesian posterior probability support for splits or clades on
phylogenetic trees.
.
The basis of the support assessment is typically given by a set of
non-parametric bootstrap replicate tree samples produced by programs
such as GARLI or RAxML, or by a set of MCMC tree samples produced by
programs such as Mr. Bayes or BEAST. The proportion of trees out of the
samples in which a particular split is found is taken to be the degree
of support for that split as indicated by the samples. The samples that
are the basis of the support can be distributed across multiple files,
and a burn-in option allows for an initial number of trees in each file
to be excluded from the analysis if they are not considered to be drawn
from the true support distribution.
Description-md5:
Homepage: https://dendropy.org/
Section: python
Priority: optional
Filename: pool/main/p/python-dendropy/sumtrees_4.6.1-1_all.deb
Source: python-dendropy
Version: 4.6.1-1
Installed-Size: 1882
Maintainer: Debian Med Packaging Team
Architecture: all
Depends: python3:any, python3-dendropy
Size: 184572
SHA256: 6209ffe6ac92cd1a0317939a8ce293a6816a15cd5aedf9f6d1ec416b7de50e25
SHA1: d708ea0d74fc5c2e2d2633867aac793e0035ea25
MD5sum: c9fca40e14762ed7c5e16e0df9a562ac
Description: Phylogenetic Tree Summarization and Annotation
SumTrees is a program to summarize non-parameteric bootstrap or
Bayesian posterior probability support for splits or clades on
phylogenetic trees.
.
The basis of the support assessment is typically given by a set of
non-parametric bootstrap replicate tree samples produced by programs
such as GARLI or RAxML, or by a set of MCMC tree samples produced by
programs such as Mr. Bayes or BEAST. The proportion of trees out of the
samples in which a particular split is found is taken to be the degree
of support for that split as indicated by the samples. The samples that
are the basis of the support can be distributed across multiple files,
and a burn-in option allows for an initial number of trees in each file
to be excluded from the analysis if they are not considered to be drawn
from the true support distribution.
Description-md5:
Homepage: https://dendropy.org/
Section: python
Priority: optional
Filename: pool/main/p/python-dendropy/sumtrees_4.6.1-1_all.deb