How to Install and Uninstall sumtrees Package on Ubuntu 16.04 LTS (Xenial Xerus)

Last updated: May 19,2024

1. Install "sumtrees" package

This is a short guide on how to install sumtrees on Ubuntu 16.04 LTS (Xenial Xerus)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                sumtrees
            
                    
    
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2. Uninstall "sumtrees" package

This is a short guide on how to uninstall sumtrees on Ubuntu 16.04 LTS (Xenial Xerus):


    
        
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                sudo apt remove
            
                        
                sumtrees
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the sumtrees package on Ubuntu 16.04 LTS (Xenial Xerus)

Package: sumtrees
Priority: optional
Section: universe/python
Installed-Size: 110
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Architecture: all
Source: python-dendropy
Version: 4.0.3+dfsg-1
Depends: python3:any, python3-dendropy
Filename: pool/universe/p/python-dendropy/sumtrees_4.0.3+dfsg-1_all.deb
Size: 23430
MD5sum: 568bacccd04c60de756f4a4fefd056d4
SHA1: 8afaa4f159f9e22ec81cef3671472e878c8f4ceb
SHA256: e96bfcbbad36860918c6675a88b36649e32a4a70d81553554b687926917b906c
Description-en: Phylogenetic Tree Summarization and Annotation
SumTrees is a program to summarize non-parameteric bootstrap or
Bayesian posterior probability support for splits or clades on
phylogenetic trees.
.
The basis of the support assessment is typically given by a set of
non-parametric bootstrap replicate tree samples produced by programs
such as GARLI or RAxML, or by a set of MCMC tree samples produced by
programs such as Mr. Bayes or BEAST. The proportion of trees out of the
samples in which a particular split is found is taken to be the degree
of support for that split as indicated by the samples. The samples that
are the basis of the support can be distributed across multiple files,
and a burn-in option allows for an initial number of trees in each file
to be excluded from the analysis if they are not considered to be drawn
from the true support distribution.
Description-md5: 4964129447ebcba981d0887bca14317e
Homepage: http://dendropy.org/
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Origin: Ubuntu