How to Install and Uninstall sumtrees Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 18,2024

1. Install "sumtrees" package

Please follow the guidelines below to install sumtrees on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                sumtrees
            
                    
    
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2. Uninstall "sumtrees" package

Here is a brief guide to show you how to uninstall sumtrees on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                sumtrees
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the sumtrees package on Ubuntu 21.10 (Impish Indri)

Package: sumtrees
Architecture: all
Version: 4.5.1-1
Priority: optional
Section: universe/python
Source: python-dendropy
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 1878
Depends: python3:any, python3-dendropy
Filename: pool/universe/p/python-dendropy/sumtrees_4.5.1-1_all.deb
Size: 180844
MD5sum: baa03a5307f008b0fb3684317a431b8e
SHA1: 7a8737f0416567354933292a0493888d1afa5ff0
SHA256: 55eccc5c6f2d826dbb6ccfe4c486217a997cfa91db59a8fc5cf8b3bd6793f4e8
SHA512: 2f281feed5895a96df37f00a88be4bec322ee63807555dd99f38304d09b91e068a4cbcdac56c2b8cfad7e4f91b74cb55252aa141b762b82220501959dac4cbbe
Homepage: https://dendropy.org/
Description-en: Phylogenetic Tree Summarization and Annotation
SumTrees is a program to summarize non-parameteric bootstrap or
Bayesian posterior probability support for splits or clades on
phylogenetic trees.
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The basis of the support assessment is typically given by a set of
non-parametric bootstrap replicate tree samples produced by programs
such as GARLI or RAxML, or by a set of MCMC tree samples produced by
programs such as Mr. Bayes or BEAST. The proportion of trees out of the
samples in which a particular split is found is taken to be the degree
of support for that split as indicated by the samples. The samples that
are the basis of the support can be distributed across multiple files,
and a burn-in option allows for an initial number of trees in each file
to be excluded from the analysis if they are not considered to be drawn
from the true support distribution.
Description-md5: 4964129447ebcba981d0887bca14317e