How to Install and Uninstall t-coffee Package on Kali Linux

Last updated: May 18,2024

1. Install "t-coffee" package

Please follow the steps below to install t-coffee on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                t-coffee
            
                    
    
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2. Uninstall "t-coffee" package

Learn how to uninstall t-coffee on Kali Linux:


    
        
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                sudo apt remove
            
                        
                t-coffee
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the t-coffee package on Kali Linux

Package: t-coffee
Version: 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1
Installed-Size: 2715
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libstdc++6 (>= 4.1.1)
Recommends: amap-align, clustalo, clustalw, dialign-tx, fsa, kalign, libsoap-lite-perl, libxml-simple-perl, mafft, muscle, mustang, ncbi-blast+, poa, prank, probcons, proda, tm-align
Suggests: boxshade, seaview, t-coffee-examples
Size: 1031640
SHA256: a9f4c84d7548b40576cd2cc07d1b0ac7990184728965fd33d7dac2014730f514
SHA1: 62d818402564e4fa62b134627922354a49c3637b
MD5sum: e45c14907e44405908ce7186b67df396
Description: Multiple Sequence Alignment
T-Coffee is a multiple sequence alignment package. Given a set of
sequences (Proteins or DNA), T-Coffee generates a multiple sequence
alignment. Version 2.00 and higher can mix sequences and structures.
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T-Coffee allows the combination of a collection of multiple/pairwise,
global or local alignments into a single model. It can also
estimate the level of consistency of each position within the new
alignment with the rest of the alignments. See the pre-print for more
information
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T-Coffee has a special called M-Coffee that makes it possible to combine the
output of many multiple sequence alignment packages. In its published version,
it uses MUSCLE, PROBCONS, POA, DiAlign-TS, MAFFT, Clustal W, PCMA and
T-Coffee. A special version has been made for Debian, DM-Coffee, that uses
only free software by replacing Clustal W by Kalign. Using the 8 Methods of
M-Coffee can sometimes be a bit heavy. You can use a subset of your favorite
methods if you prefer.
Description-md5:
Homepage: https://www.tcoffee.org/Projects/tcoffee/index.html
Tag: field::biology, field::biology:bioinformatics, implemented-in::c,
interface::commandline, role::program, scope::utility, use::analysing,
use::comparing, works-with-format::TODO, works-with-format::plaintext,
works-with::TODO
Section: science
Priority: optional
Filename: pool/main/t/t-coffee/t-coffee_13.45.0.4846264+really13.41.0.28bdc39+dfsg-1_amd64.deb