How to Install and Uninstall vdjtools Package on Kali Linux

Last updated: November 26,2024

1. Install "vdjtools" package

Learn how to install vdjtools on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                vdjtools
            
                    
    
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2. Uninstall "vdjtools" package

This tutorial shows how to uninstall vdjtools on Kali Linux:


    
        
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                sudo apt remove
            
                        
                vdjtools
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the vdjtools package on Kali Linux

Package: vdjtools
Version: 1.2.1+git20190311+repack-2
Installed-Size: 53
Maintainer: Debian Med Packaging Team
Architecture: all
Depends: libvdjtools-java, default-jre
Recommends: r-cran-ape, r-cran-ggplot2, r-cran-gplots, r-cran-mass, r-cran-plotrix, r-cran-rcolorbrewer, r-cran-reshape, r-cran-reshape2, r-cran-scales, r-cran-gridbase, r-cran-gridextra, r-cran-circlize, r-cran-venndiagram, r-cran-ffield
Size: 43252
SHA256: fd05df7308815b61cceb46d9c2866d82717a4b6d589538e8f0c37811f6c1ebfd
SHA1: 32c0262c3c73c9751346bdc66bb446936792e4da
MD5sum: 8e0604f51301c54ccfc34cd7ec5a3d20
Description: framework for post-analysis of B/T cell repertoires
VDJtools is an open-source Java/Groovy-based framework designed
to facilitate analysis of immune repertoire sequencing (RepSeq)
data. VDJtools computes a wide set of statistics and is able to perform
various forms of cross-sample analysis. Both comprehensive tabular
output and publication-ready plots are provided.
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The main aims of the VDJtools Project are:
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* To ensure consistency between post-analysis methods and results
* To save the time of bioinformaticians analyzing RepSeq data
* To create an API framework facilitating development of new RepSeq
analysis applications
* To provide a simple enough command line tool so it could be used by
immunologists and biologists with little computational background
Description-md5:
Homepage: https://github.com/mikessh/vdjtools
Section: non-free/science
Priority: optional
Filename: pool/non-free/v/vdjtools/vdjtools_1.2.1+git20190311+repack-2_all.deb