How to Install and Uninstall circlator Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: May 09,2024

1. Install "circlator" package

This is a short guide on how to install circlator on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                circlator
            
                    
    
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2. Uninstall "circlator" package

This tutorial shows how to uninstall circlator on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                circlator
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the circlator package on Ubuntu 20.10 (Groovy Gorilla)

Package: circlator
Architecture: amd64
Version: 1.5.6-1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 10302
Depends: fastaq (>= 3.12.1), python3-openpyxl, python3-pymummer, python3-pysam, python3:any, prodigal, bwa (>= 0.7.12), mummer, samtools, spades
Suggests: canu
Filename: pool/universe/c/circlator/circlator_1.5.6-1_amd64.deb
Size: 4327536
MD5sum: 842c1d0bf0038e8d25bf4060ddf2066c
SHA1: fa883afd576072b7c309585feac69e3bbfe85fdc
SHA256: 76f3087da86aa714d9f2ad58d3102942ac72b134c8a17fee5df72b9a4355e3c1
SHA512: 3480057b29ad4c6e96db561546977053f8d6587bac14c6ef44ee1fa3d57453cae246ec0e6c87e45f87029d1739e423c54dccad27f6ade227470f6bf25e97719f
Homepage: http://sanger-pathogens.github.io/circlator/
Description-en: circularize genome assemblies
Circlator is a tool to automate assembly circularization for bacterial and
small eukaryotic genomes and produce accurate linear representations of
circular sequences.
Description-md5: cf235cf3121c5ca347cea31d93662299