How to Install and Uninstall circlator Package on Ubuntu 21.10 (Impish Indri)

Last updated: November 22,2024

1. Install "circlator" package

This guide covers the steps necessary to install circlator on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                circlator
            
                    
    
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2. Uninstall "circlator" package

Please follow the guidance below to uninstall circlator on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                circlator
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the circlator package on Ubuntu 21.10 (Impish Indri)

Package: circlator
Architecture: amd64
Version: 1.5.6-5
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 10527
Depends: fastaq (>= 3.12.1), python3-openpyxl, python3-pymummer, python3-pysam, python3:any, prodigal, bwa (>= 0.7.12), mummer, samtools, spades, canu
Filename: pool/universe/c/circlator/circlator_1.5.6-5_amd64.deb
Size: 4470340
MD5sum: a88313822d114924fa771180f1e22d40
SHA1: bc51b22c88b926f149b70248ebac63ae8b79ed62
SHA256: d6e5c6564b314ff50b871f21ee02ed9978848f8c4684e0ea89c0afe5eeee8adc
SHA512: bbb2e9d901654237dfdcd11863e018ce2327d5b5f0cb60345e5d4e768a023b5bac346df6c35a3d2854a681f9c6de1e13c12c0283df3d4e28f20a41aaf8a1f5f6
Homepage: http://sanger-pathogens.github.io/circlator/
Description-en: circularize genome assemblies
Circlator is a tool to automate assembly circularization for bacterial and
small eukaryotic genomes and produce accurate linear representations of
circular sequences.
Description-md5: cf235cf3121c5ca347cea31d93662299