How to Install and Uninstall circlator Package on Ubuntu 22.04 LTS (Jammy Jellyfish)
Last updated: November 22,2024
Notice
You can also install and uninstall the circlator on the following distributions in the same way, as they are all based on the Ubuntu system
- Kubuntu 22.04 LTS
- Lubuntu 22.04 LTS
- Xubuntu 22.04 LTS
- Ubuntu MATE 22.04 LTS
- Ubuntu Studio 22.04 LTS
- Pop!_OS 22.04 LTS
- Zorin OS 16 / Zorin OS 17
- Ubuntu Budgie 22.04
1. Install "circlator" package
Here is a brief guide to show you how to install circlator on Ubuntu 22.04 LTS (Jammy Jellyfish)
$
sudo apt update
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$
sudo apt install
circlator
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2. Uninstall "circlator" package
This tutorial shows how to uninstall circlator on Ubuntu 22.04 LTS (Jammy Jellyfish):
$
sudo apt remove
circlator
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$
sudo apt autoclean && sudo apt autoremove
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3. Information about the circlator package on Ubuntu 22.04 LTS (Jammy Jellyfish)
Package: circlator
Architecture: amd64
Version: 1.5.6-6
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 10527
Depends: fastaq (>= 3.12.1), python3-openpyxl, python3-pymummer, python3-pysam, python3:any, prodigal, bwa (>= 0.7.12), mummer, samtools, spades, canu
Filename: pool/universe/c/circlator/circlator_1.5.6-6_amd64.deb
Size: 4480644
MD5sum: 194eeae6b16c39fb03c0de9b8b292934
SHA1: b12bfd7fa3c60e14e6bb1f0b2fee829cb419a83d
SHA256: 401c66ecb95dc67ca12e223f5efb90065db1a235b310c08879d975151307472a
SHA512: 8fc5ac9ad5a861eaba933b37f055581e57989ce0de3aa6452d392f00b2bbb8d7a6467e42dfa90e7716f3a69d1d1266d0fb0950ae0f5bab818f3659462b86d0bd
Homepage: http://sanger-pathogens.github.io/circlator/
Description: circularize genome assemblies
Description-md5: cf235cf3121c5ca347cea31d93662299
Architecture: amd64
Version: 1.5.6-6
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 10527
Depends: fastaq (>= 3.12.1), python3-openpyxl, python3-pymummer, python3-pysam, python3:any, prodigal, bwa (>= 0.7.12), mummer, samtools, spades, canu
Filename: pool/universe/c/circlator/circlator_1.5.6-6_amd64.deb
Size: 4480644
MD5sum: 194eeae6b16c39fb03c0de9b8b292934
SHA1: b12bfd7fa3c60e14e6bb1f0b2fee829cb419a83d
SHA256: 401c66ecb95dc67ca12e223f5efb90065db1a235b310c08879d975151307472a
SHA512: 8fc5ac9ad5a861eaba933b37f055581e57989ce0de3aa6452d392f00b2bbb8d7a6467e42dfa90e7716f3a69d1d1266d0fb0950ae0f5bab818f3659462b86d0bd
Homepage: http://sanger-pathogens.github.io/circlator/
Description: circularize genome assemblies
Description-md5: cf235cf3121c5ca347cea31d93662299