How to Install and Uninstall r-bioc-gviz Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 07,2024

1. Install "r-bioc-gviz" package

Please follow the instructions below to install r-bioc-gviz on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                r-bioc-gviz
            
                    
    
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2. Uninstall "r-bioc-gviz" package

This guide covers the steps necessary to uninstall r-bioc-gviz on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                r-bioc-gviz
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the r-bioc-gviz package on Ubuntu 20.10 (Groovy Gorilla)

Package: r-bioc-gviz
Architecture: all
Version: 1.32.0+dfsg-2
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 8964
Depends: r-base-core (>= 4.0.0.20200528-1), r-api-4.0, r-api-bioc-3.11, r-bioc-s4vectors (>= 0.9.25), r-bioc-iranges (>= 1.99.18), r-bioc-genomicranges (>= 1.17.20), r-bioc-xvector (>= 0.5.7), r-bioc-rtracklayer (>= 1.25.13), r-cran-lattice, r-cran-rcolorbrewer, r-bioc-biomart (>= 2.11.0), r-bioc-annotationdbi (>= 1.27.5), r-bioc-biobase (>= 2.15.3), r-bioc-genomicfeatures (>= 1.17.22), r-bioc-ensembldb (>= 2.11.3), r-bioc-bsgenome (>= 1.33.1), r-bioc-biostrings (>= 2.33.11), r-bioc-biovizbase (>= 1.13.8), r-bioc-rsamtools (>= 1.17.28), r-cran-latticeextra (>= 0.6-26), r-cran-matrixstats (>= 0.8.14), r-bioc-genomicalignments (>= 1.1.16), r-bioc-genomeinfodb (>= 1.1.3), r-bioc-biocgenerics (>= 0.11.3), r-cran-digest (>= 0.6.8)
Suggests: r-cran-knitr, r-cran-rmarkdown, r-cran-testthat
Filename: pool/universe/r/r-bioc-gviz/r-bioc-gviz_1.32.0+dfsg-2_all.deb
Size: 6651500
MD5sum: bf84fdbc1bb13b10d6ae9031c9adf686
SHA1: 05f0a016601960d7f3facadbf5c1e3bb0e092758
SHA256: 317d1a5a61afa51dfdf1bacb9ebac26ae93b839ac8a3b2a2f7c70fc4625325a5
SHA512: e8a2cae001274d72824f796b0830d683a015568525337a7583186fc9295da3748686f576b0cc035a0ccb02fc972dc8d2ec414f7cef716d0486c3d0d2b41312ab
Homepage: https://bioconductor.org/packages/Gviz/
Description-en: Plotting data and annotation information along genomic coordinates
Genomic data analyses requires integrated visualization of known
genomic information and new experimental data. Gviz uses the biomaRt and
the rtracklayer packages to perform live annotation queries to Ensembl
and UCSC and translates this to e.g. gene/transcript structures in
viewports of the grid graphics package. This results in genomic
information plotted together with your data.
Description-md5: a1192a0bcb8465ef96fce24dbb9e40c0