How to Install and Uninstall r-bioc-variantannotation Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 22,2024

1. Install "r-bioc-variantannotation" package

In this section, we are going to explain the necessary steps to install r-bioc-variantannotation on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                r-bioc-variantannotation
            
                    
    
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2. Uninstall "r-bioc-variantannotation" package

This guide let you learn how to uninstall r-bioc-variantannotation on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                r-bioc-variantannotation
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the r-bioc-variantannotation package on Ubuntu 20.10 (Groovy Gorilla)

Package: r-bioc-variantannotation
Architecture: amd64
Version: 1.34.0-1
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 4842
Depends: r-base-core (>= 4.0.0.20200528-1), r-api-4.0, r-api-bioc-3.11, r-bioc-biocgenerics (>= 0.15.3), r-bioc-genomeinfodb (>= 1.15.2), r-bioc-genomicranges (>= 1.37.4), r-bioc-summarizedexperiment (>= 1.9.9), r-bioc-rsamtools (>= 1.99.0), r-cran-dbi, r-bioc-zlibbioc, r-bioc-biobase, r-bioc-s4vectors (>= 0.17.24), r-bioc-iranges (>= 2.13.13), r-bioc-xvector (>= 0.19.7), r-bioc-biostrings (>= 2.47.6), r-bioc-annotationdbi (>= 1.27.9), r-bioc-rtracklayer (>= 1.39.7), r-bioc-bsgenome (>= 1.47.3), r-bioc-genomicfeatures (>= 1.31.3), r-bioc-rhtslib, libc6 (>= 2.15), libcurl4 (>= 7.18.0)
Recommends: r-cran-runit, r-bioc-snpstats
Suggests: r-bioc-annotationhub, r-cran-ggplot2
Filename: pool/universe/r/r-bioc-variantannotation/r-bioc-variantannotation_1.34.0-1_amd64.deb
Size: 3509748
MD5sum: 10e5e9e1d224bafbe7fb59bb9cdff70c
SHA1: 8ce341710f2b0e0c7a257037f461b7a89e78ac35
SHA256: 661a6cb198cb39d93bd851f6f5c970643d404e616de5823f99bccaaad98fd915
SHA512: 9f507ce07ec56035412977c54742cdb3282256e2c195bb31566dfd45f747ceab67941e97cab0772e4362f5920d96d2030b072645f4a81de4b49e82432f96f744
Homepage: https://bioconductor.org/packages/VariantAnnotation/
Description-en: BioConductor annotation of genetic variants
This BioConductor package provides R functions to annotate variants,
compute amino acid coding changess and to predict coding outcomes.
Description-md5: 17670e83de551a30abddcb85706e9bf5