How to Install and Uninstall r-bioc-variantannotation Package on Ubuntu 21.10 (Impish Indri)

Last updated: November 22,2024

1. Install "r-bioc-variantannotation" package

This guide covers the steps necessary to install r-bioc-variantannotation on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                r-bioc-variantannotation
            
                    
    
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2. Uninstall "r-bioc-variantannotation" package

Please follow the step by step instructions below to uninstall r-bioc-variantannotation on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                r-bioc-variantannotation
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the r-bioc-variantannotation package on Ubuntu 21.10 (Impish Indri)

Package: r-bioc-variantannotation
Architecture: amd64
Version: 1.36.0-1
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 4808
Depends: r-base-core (>= 4.0.3-1), r-api-4.0, r-api-bioc-3.12, r-bioc-biocgenerics (>= 0.15.3), r-bioc-matrixgenerics, r-bioc-genomeinfodb (>= 1.15.2), r-bioc-genomicranges (>= 1.41.5), r-bioc-summarizedexperiment (>= 1.19.5), r-bioc-rsamtools (>= 1.99.0), r-cran-dbi, r-bioc-zlibbioc, r-bioc-biobase, r-bioc-s4vectors (>= 0.27.12), r-bioc-iranges (>= 2.23.9), r-bioc-xvector (>= 0.29.2), r-bioc-biostrings (>= 2.57.2), r-bioc-annotationdbi (>= 1.27.9), r-bioc-rtracklayer (>= 1.39.7), r-bioc-bsgenome (>= 1.47.3), r-bioc-genomicfeatures (>= 1.31.3), r-bioc-rhtslib, libc6 (>= 2.15), libcurl4 (>= 7.18.0)
Recommends: r-cran-runit, r-bioc-snpstats
Suggests: r-bioc-annotationhub, r-cran-ggplot2, r-bioc-biocstyle
Filename: pool/universe/r/r-bioc-variantannotation/r-bioc-variantannotation_1.36.0-1_amd64.deb
Size: 3500308
MD5sum: 6948daab8fcb653487be2506844387be
SHA1: f5fb691a04aafd4c2a6ac1c21815acab321eb805
SHA256: ed2b626ddefe4e8a908f2fe094ab9d076dbf0c08344c40fc8b4c559268785241
SHA512: 4bf5612c88a1fb75c29cb3b6e5d7135ba09ace1eedd7d98b626771936b9ff4058958a30ead60cea27a620a6f7474a087107781acec9a11fd868640bc87ca1bac
Homepage: https://bioconductor.org/packages/VariantAnnotation/
Description-en: BioConductor annotation of genetic variants
This BioConductor package provides R functions to annotate variants,
compute amino acid coding changess and to predict coding outcomes.
Description-md5: 17670e83de551a30abddcb85706e9bf5