How to Install and Uninstall samtools Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 22,2024

1. Install "samtools" package

Please follow the guidance below to install samtools on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                samtools
            
                    
    
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2. Uninstall "samtools" package

Please follow the steps below to uninstall samtools on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                samtools
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the samtools package on Ubuntu 20.10 (Groovy Gorilla)

Package: samtools
Architecture: amd64
Version: 1.10-4
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 1146
Depends: libc6 (>= 2.29), libhts3 (>= 1.10), libncurses6 (>= 6), libtinfo6 (>= 6), zlib1g (>= 1:1.1.4)
Suggests: cwltool
Breaks: bio-tradis (<= 1.4.5+dfsg-1), iva (<= 1.0.9+ds-6)
Filename: pool/universe/s/samtools/samtools_1.10-4_amd64.deb
Size: 496228
MD5sum: ae073626609239cf89d27b826de8db05
SHA1: 876286c12fbcdebfb3bc66a070e14c77029e0bad
SHA256: 02c9ac94d5bbd1f66ae04dd88eab04005f2706a02e77c633d59c2776581e0e90
SHA512: 95f9a5eb1f9589545c321884c607f939f7a8730983286980c05f90f5e89f4e75a954f74ca09ebbd54f4e9855e4fbb418955c5e327cb765d08ff804c0605e2763
Homepage: http://www.htslib.org/
Description-en: processing sequence alignments in SAM, BAM and CRAM formats
Samtools is a set of utilities that manipulate nucleotide sequence alignments
in the binary BAM format. It imports from and exports to the ascii SAM
(Sequence Alignment/Map) and CRAM formats, does sorting, merging and indexing,
and allows one to retrieve reads in any regions swiftly. It is designed to work
on a stream, and is able to open a BAM or CRAM (not SAM) file on a remote FTP
or HTTP server.
Description-md5: 7ede2464ff1fbf70b3103067b7192874