How to Install and Uninstall hyphy-mpi Package on Ubuntu 21.04 (Hirsute Hippo)

Last updated: December 23,2024

1. Install "hyphy-mpi" package

This is a short guide on how to install hyphy-mpi on Ubuntu 21.04 (Hirsute Hippo)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                hyphy-mpi
            
                    
    
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2. Uninstall "hyphy-mpi" package

This tutorial shows how to uninstall hyphy-mpi on Ubuntu 21.04 (Hirsute Hippo):


    
        
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                sudo apt remove
            
                        
                hyphy-mpi
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the hyphy-mpi package on Ubuntu 21.04 (Hirsute Hippo)

Package: hyphy-mpi
Architecture: amd64
Version: 2.5.28+dfsg-2
Priority: optional
Section: universe/science
Source: hyphy
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 7589
Depends: libc6 (>= 2.33), libcurl3-gnutls (>= 7.16.2), libgcc-s1 (>= 3.0), libgomp1 (>= 4.9), libopenmpi3 (>= 4.1.0), libsqlite3-0 (>= 3.5.9), libstdc++6 (>= 5), hyphy-common (= 2.5.28+dfsg-2)
Filename: pool/universe/h/hyphy/hyphy-mpi_2.5.28+dfsg-2_amd64.deb
Size: 1180232
MD5sum: 6e59762671aa373fa2029bda4c0e730c
SHA1: 4a94d5897b88b0b7ed741a1476649c98a77c59a6
SHA256: 6289e6c7438336313525b38a218ca811001606dd6eef32cdbe5ce40a578bb557
SHA512: ae2a31c003b9f016cdccc7abdfe4079a2a03e77a04122f6488440d146ff3c99f770bb8c17e8fefca2861b8c523e7b03f93824d38e8f9166de3edda3b073f061a
Homepage: https://hyphy.org/
Description-en: Hypothesis testing using Phylogenies (MPI version)
HyPhy is an open-source software package for the analysis of genetic
sequences using techniques in phylogenetics, molecular evolution, and
machine learning. It features a complete graphical user interface (GUI)
and a rich scripting language for limitless customization of analyses.
Additionally, HyPhy features support for parallel computing environments
(via message passing interface) and it can be compiled as a shared
library and called from other programming environments such as Python or
R. Continued development of HyPhy is currently supported in part by an
NIGMS R01 award 1R01GM093939.
.
This package provides an executable using MPI to do multiprocessing.
Description-md5: bf880100fd3d0b8d321965866c6d667b