How to Install and Uninstall hyphy-mpi Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 18,2024

1. Install "hyphy-mpi" package

Please follow the guidelines below to install hyphy-mpi on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                hyphy-mpi
            
                    
    
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2. Uninstall "hyphy-mpi" package

Please follow the instructions below to uninstall hyphy-mpi on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                hyphy-mpi
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the hyphy-mpi package on Ubuntu 21.10 (Impish Indri)

Package: hyphy-mpi
Architecture: amd64
Version: 2.5.28+dfsg-3
Priority: optional
Section: universe/science
Source: hyphy
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 8993
Depends: libc6 (>= 2.33), libcurl3-gnutls (>= 7.16.2), libgcc-s1 (>= 3.3.1), libgomp1 (>= 4.9), libopenmpi3 (>= 4.1.0), libsqlite3-0 (>= 3.5.9), libstdc++6 (>= 5), hyphy-common (= 2.5.28+dfsg-3)
Filename: pool/universe/h/hyphy/hyphy-mpi_2.5.28+dfsg-3_amd64.deb
Size: 2083736
MD5sum: 040f3678f7431128cf20a61dd2646579
SHA1: 6a5567f35197754b8d4240cc7292d68ffda44489
SHA256: 313fd1090771d564e30a798edd7c0e54564abb490dba8e5c068d5308831f3108
SHA512: dce41b56846d58df37db364537f76a7e8cb07b261b59579fa30837126d6d1ea4f0ab1bffa8001083b1ee6043bd3a37963e04caecaa468ee63cbbfab6f295f7b2
Homepage: https://hyphy.org/
Description-en: Hypothesis testing using Phylogenies (MPI version)
HyPhy is an open-source software package for the analysis of genetic
sequences using techniques in phylogenetics, molecular evolution, and
machine learning. It features a complete graphical user interface (GUI)
and a rich scripting language for limitless customization of analyses.
Additionally, HyPhy features support for parallel computing environments
(via message passing interface) and it can be compiled as a shared
library and called from other programming environments such as Python or
R. Continued development of HyPhy is currently supported in part by an
NIGMS R01 award 1R01GM093939.
.
This package provides an executable using MPI to do multiprocessing.
Description-md5: bf880100fd3d0b8d321965866c6d667b