How to Install and Uninstall gatb-core Package on Ubuntu 21.10 (Impish Indri)

Last updated: September 20,2024

1. Install "gatb-core" package

Please follow the steps below to install gatb-core on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                gatb-core
            
                    
    
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2. Uninstall "gatb-core" package

Please follow the guidelines below to uninstall gatb-core on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                gatb-core
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the gatb-core package on Ubuntu 21.10 (Impish Indri)

Package: gatb-core
Architecture: amd64
Version: 1.4.2+dfsg-6
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 18694
Depends: libc6 (>= 2.29), libcppunit-1.15-0, libgcc-s1 (>= 3.4), libhdf5-103-1, libstdc++6 (>= 9), zlib1g (>= 1:1.2.6)
Filename: pool/universe/g/gatb-core/gatb-core_1.4.2+dfsg-6_amd64.deb
Size: 2561648
MD5sum: 103058784efe21a070613d133e5fa368
SHA1: c74f2b1219b2d6d8a2b69932608414873d36d9fd
SHA256: 153f50890f4b6ac5d9323484f2cda4f69412cf7f851dbe32995b17e7550e0447
SHA512: 48e62b655fac9cff846c0fdff8b10a5394c327df55211f2640a339429efff3a057bd4f6d57feb961c2ad3c46f21e2f2dd7a97827564f8a4eebea6e86a1ced3fd
Homepage: https://github.com/GATB/gatb-core
Description-en: Genome Analysis Toolbox with de-Bruijn graph
The GATB-CORE project provides a set of highly efficient
algorithms to analyse NGS data sets. These methods enable
the analysis of data sets of any size on multi-core desktop
computers, including very huge amount of reads data coming
from any kind of organisms such as bacteria, plants,
animals and even complex samples (e.g. metagenomes).
Read more about GATB at https://gatb.inria.fr/.
By itself GATB-CORE is not an NGS data analysis tool.
However, it can be used to create such tools. There already
exist a set of ready-to-use tools relying on GATB-CORE
library: see https://gatb.inria.fr/software/
Description-md5: 7fb8b874b800dfaad088eff4ae5d0206