How to Install and Uninstall khmer Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 03,2024

1. Install "khmer" package

Here is a brief guide to show you how to install khmer on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                khmer
            
                    
    
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2. Uninstall "khmer" package

This guide let you learn how to uninstall khmer on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                khmer
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the khmer package on Ubuntu 21.10 (Impish Indri)

Package: khmer
Architecture: amd64
Version: 2.1.2+dfsg-8
Multi-Arch: foreign
Priority: optional
Section: universe/python
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 29863
Depends: khmer-common, python3 (<< 3.10), python3-screed (>= 1.0), libbz2-1.0, libc6 (>= 2.29), libgcc-s1 (>= 3.4), libgomp1 (>= 4.9), libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.3.4), cython3 (>= 0.26.1), python3 (>= 3.9~), python3-bz2file, python3:any
Filename: pool/universe/k/khmer/khmer_2.1.2+dfsg-8_amd64.deb
Size: 6688516
MD5sum: 1aff048399ce8c2c20176118160aa4bb
SHA1: 832b42b2645bb561bd968f1a14023e4f8901e1ad
SHA256: 996d4673244da0ac699599dc93f417ca3bae5e816453e93d99a99b1dc101c448
SHA512: b0384c35dcc18ded0361c14207e30ae3ea58e7c7d6c5f29b4048f0a42023a8feac7d016a03b84181d5367de067f57c6595feb33ca51555661f0a8b8ffe566178
Homepage: https://khmer.readthedocs.org
Description-en: in-memory DNA sequence kmer counting, filtering & graph traversal
khmer is a library and suite of command line tools for working with DNA
sequence. It is primarily aimed at short-read sequencing data such as that
produced by the Illumina platform. khmer takes a k-mer-centric approach to
sequence analysis, hence the name.
Description-md5: fcb7ec9befc5e3aef9f670bd332040fb