How to Install and Uninstall proteinortho Package on Ubuntu 21.10 (Impish Indri)

Last updated: November 07,2024

1. Install "proteinortho" package

Please follow the step by step instructions below to install proteinortho on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                proteinortho
            
                    
    
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2. Uninstall "proteinortho" package

This guide covers the steps necessary to uninstall proteinortho on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                proteinortho
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the proteinortho package on Ubuntu 21.10 (Impish Indri)

Package: proteinortho
Architecture: amd64
Version: 6.0.28+dfsg-1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 786
Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.0), libgomp1 (>= 6), liblapack3, libstdc++6 (>= 5.2), perl:any, python3, ncbi-blast+, diamond-aligner, procps
Filename: pool/universe/p/proteinortho/proteinortho_6.0.28+dfsg-1_amd64.deb
Size: 203264
MD5sum: e25ae464dedd5fc027ae607c57667404
SHA1: 6abd895fd7dffab63e6391e3bf9900e6aa75ce76
SHA256: 44b638b39bbdd7e38eaded642ad67708ff75a3dc06c42f4b8289c0446a3fed48
SHA512: e09bdc1d50706dc79f86be80f9524808a3686bf46ab5c46fd89bf7cc87e2831004eba08724a05813eb1469b34e6cac7f5c8dd70c8c83119c7b9e9acbb3fe497a
Homepage: https://gitlab.com/paulklemm_PHD/proteinortho
Description-en: Detection of (Co-)orthologs in large-scale protein analysis
Proteinortho is a stand-alone tool that is geared towards large datasets
and makes use of distributed computing techniques when run on multi-core
hardware. It implements an extended version of the reciprocal best
alignment heuristic. Proteinortho was applied to compute orthologous
proteins in the complete set of all 717 eubacterial genomes available at
NCBI at the beginning of 2009. Authors succeeded identifying thirty
proteins present in 99% of all bacterial proteomes.
Description-md5: e3a91e234fd7863ad7849747c6f6e226