How to Install and Uninstall proteinortho Package on Ubuntu 16.04 LTS (Xenial Xerus)

Last updated: December 24,2024

1. Install "proteinortho" package

Learn how to install proteinortho on Ubuntu 16.04 LTS (Xenial Xerus)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                proteinortho
            
                    
    
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2. Uninstall "proteinortho" package

This guide covers the steps necessary to uninstall proteinortho on Ubuntu 16.04 LTS (Xenial Xerus):


    
        
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                sudo apt remove
            
                        
                proteinortho
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the proteinortho package on Ubuntu 16.04 LTS (Xenial Xerus)

Package: proteinortho
Priority: optional
Section: universe/science
Installed-Size: 363
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Architecture: amd64
Version: 5.11+dfsg-1
Depends: libc6 (>= 2.14), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 5.2), ncbi-blast+, python
Filename: pool/universe/p/proteinortho/proteinortho_5.11+dfsg-1_amd64.deb
Size: 243188
MD5sum: 3481c50e4ce153255ad9ab10792bb8c6
SHA1: bbd7e4dbbc2192981218a74c6c483ac4eb9e5ebe
SHA256: bf3a7a856f4b4282689e2f5a3f3af65a48bce4b275e1fc7f75913986ea65b7d1
Description-en: Detection of (Co-)orthologs in large-scale protein analysis
Proteinortho is a stand-alone tool that is geared towards large datasets
and makes use of distributed computing techniques when run on multi-core
hardware. It implements an extended version of the reciprocal best
alignment heuristic. Proteinortho was applied to compute orthologous
proteins in the complete set of all 717 eubacterial genomes available at
NCBI at the beginning of 2009. Authors succeeded identifying thirty
proteins present in 99% of all bacterial proteomes.
Description-md5: e3a91e234fd7863ad7849747c6f6e226
Homepage: https://www.bioinf.uni-leipzig.de/Software/proteinortho/
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Origin: Ubuntu