How to Install and Uninstall r-bioc-structuralvariantannotation Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 04,2024

1. Install "r-bioc-structuralvariantannotation" package

Here is a brief guide to show you how to install r-bioc-structuralvariantannotation on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                r-bioc-structuralvariantannotation
            
                    
    
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2. Uninstall "r-bioc-structuralvariantannotation" package

This guide covers the steps necessary to uninstall r-bioc-structuralvariantannotation on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                r-bioc-structuralvariantannotation
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the r-bioc-structuralvariantannotation package on Ubuntu 21.10 (Impish Indri)

Package: r-bioc-structuralvariantannotation
Architecture: all
Version: 1.6.0+ds-1
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 702
Depends: r-base-core (>= 4.0.4-1build1), r-api-4.0, r-api-bioc-3.12, r-bioc-genomicranges, r-bioc-rtracklayer, r-bioc-variantannotation, r-bioc-biocgenerics, r-cran-assertthat, r-bioc-biostrings, r-cran-stringr, r-cran-dplyr, r-cran-rlang
Recommends: r-cran-testthat
Suggests: r-cran-ggplot2, r-cran-devtools, r-cran-roxygen2, r-cran-covr, r-cran-knitr, r-bioc-biovizbase, r-cran-circlize, r-bioc-genomeinfodb, r-bioc-iranges, r-bioc-s4vectors, r-bioc-summarizedexperiment
Filename: pool/universe/r/r-bioc-structuralvariantannotation/r-bioc-structuralvariantannotation_1.6.0+ds-1_all.deb
Size: 234932
MD5sum: 695f4a436e3f7a17c634efc93f89ad8c
SHA1: 861c81f81cea1a61045c1ca7cee1e173b9e5eda6
SHA256: fc86deeb622bb334338ca0715142b115e9349d4d6a7dfe74a2f0527606f96c70
SHA512: a37bdcb60b924b7cc01f14b7fc2ff1c833e599c61ede172bb01c5416e187276e6f8e30abdc36ddff390fbf1448c436aff1995dd43c47e6ad429f560fc7a1fedc
Homepage: https://bioconductor.org/packages/StructuralVariantAnnotation/
Description-en: Variant annotations for structural variants
StructuralVariantAnnotation contains useful helper
functions for dealing with structural variants in VCF format.
The packages contains functions for parsing VCFs from a number
of popular callers as well as functions for dealing with
breakpoints involving two separate genomic loci encoded as
GRanges objects.
Description-md5: da0d30e1c2fddfc05ec9f7a5a97d4001