How to Install and Uninstall sambamba Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 17,2024

1. Install "sambamba" package

Learn how to install sambamba on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                sambamba
            
                    
    
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2. Uninstall "sambamba" package

This tutorial shows how to uninstall sambamba on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                sambamba
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the sambamba package on Ubuntu 21.10 (Impish Indri)

Package: sambamba
Architecture: amd64
Version: 0.8.0-1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 2721
Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.0), liblz4-1 (>= 0.0~r127), libphobos2-ldc-shared94 (>= 1:1.24.0)
Filename: pool/universe/s/sambamba/sambamba_0.8.0-1_amd64.deb
Size: 628932
MD5sum: f792b26a9d3e385b7d897e11b16a2954
SHA1: 48e755574030c0975adbdbcf1154432e239d6439
SHA256: 44c8df52fa146b4736d0c22c89bc0a754c231c45aebde6e520f3831747176326
SHA512: 961721df83ed79e0e79dc5de7168642f16c75a2adde91df31e55abd9303fe1f35ad57b69ed079259b416872707ecffa51eb4cf18f244ea5192e261992e70ae49
Homepage: https://github.com/lomereiter/sambamba
Description-en: tools for working with SAM/BAM data
Sambamba positions itself as a performant alternative
to samtools and provides tools for
* Powerful filtering with sambamba view --filter
* Picard-like SAM header merging in the merge tool
* Optional for operations on whole BAMs
* Fast copying of a region to a new file with the slice tool
* Duplicate marking/removal, using the Picard criteria
Description-md5: cffb799478d991a3e309bbae0c0e0b13