How to Install and Uninstall seqtk Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 19,2024

1. Install "seqtk" package

In this section, we are going to explain the necessary steps to install seqtk on Ubuntu 21.10 (Impish Indri)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                seqtk
            
                    
    
    Copied

2. Uninstall "seqtk" package

This guide covers the steps necessary to uninstall seqtk on Ubuntu 21.10 (Impish Indri):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                seqtk
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the seqtk package on Ubuntu 21.10 (Impish Indri)

Package: seqtk
Architecture: amd64
Version: 1.3-2
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 83
Depends: libc6 (>= 2.29), zlib1g (>= 1:1.1.4)
Filename: pool/universe/s/seqtk/seqtk_1.3-2_amd64.deb
Size: 30244
MD5sum: 1192ecf4f05cde6680782829dfadb8a3
SHA1: a0863254e32eb90f1695dbb864a2659eff342271
SHA256: e6581802777a6719cfc6a92765bf29ad1392ad180413abdcf6b5b91074c76df0
SHA512: 45b320b1b4cd4d2f6d96e1da7b105494eb6132aef3dbf85a1440ca98d5e3e1f045fbd0e98cf157774ef654fa4c7cf68dc617bf0b0ce91487f08e8aac7b734dec
Homepage: https://github.com/lh3/seqtk
Description-en: Fast and lightweight tool for processing sequences in the FASTA or FASTQ format
Currently, seqtk supports quality based trimming with the phred
algorithm, converting fastq to fasta, reverse complementing sequences,
extracting or masking subsequences in regions given in a BED/name list
file, and more. It contains a subsampling module to sample exactly n
sequences or a fraction of sequences.
.
Seqtk supports both fasta and fastq input files, which can be
optionally gzip compressed.
Description-md5: 308a3dd5ca3e5c5c42215a0c840a4a23