How to Install and Uninstall seqmagick Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 19,2024

1. Install "seqmagick" package

Learn how to install seqmagick on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                seqmagick
            
                    
    
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2. Uninstall "seqmagick" package

Please follow the guidance below to uninstall seqmagick on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                seqmagick
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the seqmagick package on Ubuntu 21.10 (Impish Indri)

Package: seqmagick
Architecture: all
Version: 0.8.4-1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 223
Depends: python3-biopython, python3-pygtrie, python3:any
Filename: pool/universe/s/seqmagick/seqmagick_0.8.4-1_all.deb
Size: 40272
MD5sum: fe26e1a152f9d1cbec6ee9ce4fd04d2e
SHA1: c52e085ed720c313558e542d6457f0b79d2ee7d3
SHA256: 6f1bc5b5cbbe4a2a31026e14702086babf8ad9243cb43d663ae6361183ee4db8
SHA512: 39c0b0388bf7cdfd3e1ac7510d393f2f4c4586a2c13a51842dcb51a93e92c237fd1ca0469de92129c0cf92116c093a49490f1e041ba733adcc1b5eb4a1e48f2b
Homepage: https://github.com/fhcrc/seqmagick/
Description-en: imagemagick-like frontend to Biopython SeqIO
Seqmagick is a little utility to expose the file format conversion
in BioPython in a convenient way.
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Features include:
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* Modifying sequences:
- Remove gaps
- Reverse & reverse complement
- Trim to a range of residues
- Change case
- Sort by length or ID
* Displaying information about sequence files
* Subsetting sequence files by:
- Position
- ID
- Deduplication
* Filtering sequences by quality score
* Trimming alignments to a region of interest defined by the forward
and reverse primers
Description-md5: e95ea82bff0bcb456ddd034e47497452